Aliases for LOC105372633 Gene

Subcategory (RNA class) for LOC105372633 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for LOC105372633 Gene

  • Uncharacterized LOC105372633 3
  • NONHSAG031891 92
  • Lnc-SLC2A10-9 168

External Ids for LOC105372633 Gene

Previous GeneCards Identifiers for LOC105372633 Gene

  • GC20U900938

Summaries for LOC105372633 Gene

GeneCards Summary for LOC105372633 Gene

LOC105372633 (Uncharacterized LOC105372633) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105372633 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372633 Gene

Genomics for LOC105372633 Gene

GeneHancer (GH) Regulatory Elements for LOC105372633 Gene

Promoters and enhancers for LOC105372633 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J046404 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 -0.3 -267 4.2 HNRNPK ZBTB40 ZNF217 EP300 CTCF NRF1 POLR2G SP1 PHF8 ZFX ELMO2 LOC105372633 MKRN7P SLC35C2 NCOA5 TP53RK RF00017-3602
GH20J046410 Enhancer 1 ENCODE CraniofacialAtlas 0.7 +4.3 4348 1.1 CTCF ZSCAN5C SIN3A REST ZNF740 MYC RAD21 TBX3 SMC3 MXI1 ELMO2 ZSWIM1 SLC35C2 NCOA5 LOC105372633
GH20J046398 Enhancer 1.3 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 -5.5 -5507 5.1 TGIF2 NR2F2 TCF12 ZBTB17 CEBPB SPI1 MAFK FOS MAX MXI1 RF00017-3602 ELMO2 SLC35C2 CD40 LOC105372633
GH20J046430 Enhancer 0.7 FANTOM5 Ensembl 0.4 +24.4 24413 0.8 NFATC1 BCL3 CEBPB EZH2 ZSCAN4 MNT ELMO2 SLC12A5 CDH22 ZNF663P ZNF334 LOC105372633
GH20J046422 Enhancer 0.5 Ensembl 0.4 +17.1 17133 1 FOS YY1 CEBPB CEBPG HLF STAT3 ELMO2 LOC105372633 ZNF663P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372633 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372633 Gene

Genomic Locations for LOC105372633 Gene
chr20:46,406,768-46,455,687
(GRCh38/hg38)
Size:
48,920 bases
Orientation:
Plus strand

Genomic View for LOC105372633 Gene

Genes around LOC105372633 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372633 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372633 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372633 Gene

Proteins for LOC105372633 Gene

Post-translational modifications for LOC105372633 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372633 Gene

Domains & Families for LOC105372633 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372633 Gene

Function for LOC105372633 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372633 Gene

Localization for LOC105372633 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372633 Gene

Pathways & Interactions for LOC105372633 Gene

PathCards logo

SuperPathways for LOC105372633 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105372633 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372633 Gene

Drugs & Compounds for LOC105372633 Gene

No Compound Related Data Available

Transcripts for LOC105372633 Gene

mRNA/cDNA for LOC105372633 Gene

5 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
1 NONCODE transcripts :
4 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372633 Gene

No ASD Table

Relevant External Links for LOC105372633 Gene

GeneLoc Exon Structure for
LOC105372633

Expression for LOC105372633 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372633 Gene

Orthologs for LOC105372633 Gene

No data available for Orthologs and Evolution for LOC105372633 Gene

Paralogs for LOC105372633 Gene

No data available for Paralogs for LOC105372633 Gene

Variants for LOC105372633 Gene

Additional dbSNP identifiers (rs#s) for LOC105372633 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372633 Gene

Disorders for LOC105372633 Gene

No disorders were found for LOC105372633 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372633 Gene

Publications for LOC105372633 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54

No data available for Mastermind for LOC105372633 Gene

Products for LOC105372633 Gene

Sources for LOC105372633 Gene