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Aliases for LOC105372632 Gene

Subcategory (RNA class) for LOC105372632 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372632 Gene

  • Uncharacterized LOC105372632 3

External Ids for LOC105372632 Gene

Previous GeneCards Identifiers for LOC105372632 Gene

  • GC20U901093

Summaries for LOC105372632 Gene

GeneCards Summary for LOC105372632 Gene

LOC105372632 (Uncharacterized LOC105372632) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372632 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372632 Gene

Genomics for LOC105372632 Gene

GeneHancer (GH) Regulatory Elements for LOC105372632 Gene

Promoters and enhancers for LOC105372632 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J046021 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 600.7 -1.0 -983 2.8 SP1 ZFX CTCF ZNF148 MLLT1 ZNF24 TFE3 ZBTB7A YY1 SP7 SLC12A5 LOC105372632 SLC12A5-AS1 CD40 PCIF1 ZNF334 NCOA5 SYS1 PLTP
GH20J046088 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.2 +66.6 66616 3.6 ZFX ELF3 MNT ZNF148 NKRF POLR2A CEBPG CSDE1 ZNF687 ZSCAN21 NCOA5 ZNF335 PCIF1 TP53RK ZSWIM1 SLC35C2 ZNF334 SNX21 CD40 PIGT
GH20J046032 Enhancer 1.1 Ensembl ENCODE 0.4 +11.0 11017 7.2 ZSCAN21 SP7 KLF14 PRDM1 MZF1 GLIS2 ZBTB8A ZNF600 PRDM10 ZIC2 CD40 NCOA5 SLC12A5 NEURL2 PLTP LOC105372632
GH20J046041 Enhancer 1.1 Ensembl ENCODE 0.3 +20.7 20717 8.6 ZNF652 ELF3 CEBPG AHR TFE3 PPARG SP5 ZNF644 KAT8 HMG20B SLC12A5 CD40 SLC35C2 LOC105372632 NCOA5
GH20J046029 Promoter 0.8 EPDnew 0.4 +6.2 6212 0.1 POLR2A EZH2 EGR1 ZGPAT SLC12A5 NCOA5 CD40 LOC105372632
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372632 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372632 Gene

Genomic Locations for LOC105372632 Gene
chr20:46,022,984-46,023,581
(GRCh38/hg38)
Size:
598 bases
Orientation:
Plus strand

Genomic View for LOC105372632 Gene

Genes around LOC105372632 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372632 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372632 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372632 Gene

Proteins for LOC105372632 Gene

Post-translational modifications for LOC105372632 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372632 Gene

Domains & Families for LOC105372632 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372632 Gene

Function for LOC105372632 Gene

Phenotypes From GWAS Catalog for LOC105372632 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372632 Gene

Localization for LOC105372632 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372632 Gene

Pathways & Interactions for LOC105372632 Gene

PathCards logo

SuperPathways for LOC105372632 Gene

No Data Available

Interacting Proteins for LOC105372632 Gene

Gene Ontology (GO) - Biological Process for LOC105372632 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372632 Gene

Drugs & Compounds for LOC105372632 Gene

No Compound Related Data Available

Transcripts for LOC105372632 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372632 Gene

No ASD Table

Relevant External Links for LOC105372632 Gene

GeneLoc Exon Structure for
LOC105372632

No data available for mRNA/cDNA for LOC105372632 Gene

Expression for LOC105372632 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372632 Gene

Orthologs for LOC105372632 Gene

No data available for Orthologs and Evolution for LOC105372632 Gene

Paralogs for LOC105372632 Gene

No data available for Paralogs for LOC105372632 Gene

Variants for LOC105372632 Gene

Sequence variations from dbSNP and Humsavar for LOC105372632 Gene

SNP ID Clin Chr 20 pos Variation AA Info Type
rs1001822243 -- 46,024,077(+) C/T downstream_transcript_variant
rs1002098209 -- 46,023,103(+) G/A intron_variant
rs1003388806 -- 46,022,381(+) G/A upstream_transcript_variant
rs1003483398 -- 46,022,203(+) G/A upstream_transcript_variant
rs1004041074 -- 46,023,129(+) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372632 Gene

Disorders for LOC105372632 Gene

No disorders were found for LOC105372632 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372632 Gene

Publications for LOC105372632 Gene

No publications were found for LOC105372632 Gene.

No data available for External Links for LOC105372632 Gene

Products for LOC105372632 Gene

Sources for LOC105372632 Gene

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