Aliases for LOC105372620 Gene
Subcategory (RNA class) for LOC105372620 Gene
ncRNA
Quality Score for this RNA gene is
13
Aliases for LOC105372620 Gene
- Uncharacterized LOC105372620 3
External Ids for LOC105372620 Gene
- Entrez Gene: 105372620
Previous GeneCards Identifiers for LOC105372620 Gene
- GC20U901002
Summaries for LOC105372620 Gene
GeneCards Summary for LOC105372620 Gene
LOC105372620 (Uncharacterized LOC105372620) is an RNA Gene, and is affiliated with the ncRNA class.
Additional gene information for LOC105372620 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372620 Gene
Genomics for LOC105372620 Gene
GeneHancer (GH) Regulatory Elements for LOC105372620 Gene
Promoters and enhancers for LOC105372620 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH20J040676 | Enhancer | 0.8 | Ensembl dbSUPER | 750.6 | +1.7 | 1674 | 3.2 | DACH1 EZH2 GMEB1 PKNOX1 POLR2A ZBTB2 FOXA2 CREB1 ZKSCAN1 CUX1 | LOC105372620 HSALNG0130120 | |
| GH20J040686 | Promoter/Enhancer | 1.8 | Ensembl ENCODE CraniofacialAtlas dbSUPER | 0.4 | -9.6 | -9626 | 6.2 | CTCF ZBTB6 POLR2A MIXL1 NFYC HLF RAD21 MNT SP1 TFE3 | MAFB CHD6 PLCG1 LOC105372620 | |
| GH20J040681 | Enhancer | 1 | ENCODE dbSUPER | 0.6 | -3.7 | -3723 | 0.9 | MLX RBPJ NR2F6 MIXL1 HLF RAD21 ZNF652 RERE ELF3 SP1 | LOC105372620 MAFB | |
| GH20J040683 | Enhancer | 0.6 | FANTOM5 ENCODE dbSUPER | 0.6 | -4.9 | -4865 | 0.8 | EZH2 | MAFB LOC105372620 | |
| GH20J040680 | Enhancer | 0.3 | dbSUPER | 0.6 | -2.4 | -2355 | 0.8 | JUNB BATF | LOC105372620 MAFB |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC105372620 on UCSC Golden Path with GeneCards custom track
Genomic Locations for LOC105372620 Gene
Genomic Locations for LOC105372620 Gene
- chr20:40,677,232-40,678,675
- (GRCh38/hg38)
- Size:
- 1,444 bases
- Orientation:
- Minus strand
Genomic View for LOC105372620 Gene
Genes around LOC105372620 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 20q12 by Entrez Gene
LOC105372620 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC105372620 Gene
Proteins for LOC105372620 Gene
Post-translational modifications for LOC105372620 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105372620
- Origene Custom Protein Services for LOC105372620
No data available for DME Specific Peptides for LOC105372620 Gene
Domains & Families for LOC105372620 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372620 Gene
Function for LOC105372620 Gene
Phenotypes From GWAS Catalog for LOC105372620 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372620 Gene
Localization for LOC105372620 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372620 Gene
Transcripts for LOC105372620 Gene
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LOC105372620 Gene
- GeneLoc Exon Structure for
- LOC105372620
No data available for mRNA/cDNA for LOC105372620 Gene
Expression for LOC105372620 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372620 Gene
Orthologs for LOC105372620 Gene
No data available for Orthologs and Evolution for LOC105372620 Gene
Paralogs for LOC105372620 Gene
No data available for Paralogs for LOC105372620 Gene
Variants for LOC105372620 Gene
| SNP ID | Clin | Chr 20 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1002157063 | -- | 40,679,922(-) | C/A | upstream_transcript_variant | |
| rs1002185885 | -- | 40,679,181(-) | T/C | upstream_transcript_variant | |
| rs1002486903 | -- | 40,678,084(-) | G/T | intron_variant | |
| rs1005299368 | -- | 40,677,060(-) | C/T | downstream_transcript_variant | |
| rs1005643801 | -- | 40,679,167(-) | C/G | upstream_transcript_variant |
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372620 Gene
Disorders for LOC105372620 Gene
No disorders were found for LOC105372620 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372620 Gene
Publications for LOC105372620 Gene
No publications were found for LOC105372620 Gene.
No data available for External Links for LOC105372620 Gene
Products for LOC105372620 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
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- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105372620
- Origene Custom Protein Services for LOC105372620
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- Lentiviral ORF Clones
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Sources for LOC105372620 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
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- (22) IntAct
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- (24) PharmGKB
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- (26) HMDB
- (27) AceView
- (28) ASD
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- (30) CGAP SAGE
- (31) SOURCE
- (32) HomoloGene
- (33) PanEnsembl
- (34) euGenes
- (35) SGD
- (36) FlyBase
- (37) WormBase
- (38) Pseudogene
- (39) DGV
- (40) dbSNP
- (41) GenAtlas
- (42) HGMD
- (43) GAD
- (44) BGMUT
- (45) HuGE
- (46) Atlas
- (47) GenBank
- (48) H-invDB
- (49) HORDE
- (50) HUGE
- (51) IMGT
- (52) Leiden
- (53) miRBase
- (54) DME
- (55) OriGene
- (56) PubMed
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- (58) TGDB
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- (60) Abcam
- (61) Novus Biologicals
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- (63) Sino Biological
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- (65) Qiagen
- (66) OCA
- (67) Proteopedia
- (68) MOPED
- (69) neXtProt
- (70) Reactome
- (71) GeneGo (Thomson Reuters)
- (72) DISEASES
- (73) SIMAP
- (74) GenomeRNAi
- (75) LifeMap
- (76) miRTarBase
- (77) MalaCards
- (78) Invitrogen
- (79) BitterDB
- (80) ESI-BIO
- (81) RefSeq
- (82) BioSystems
- (83) MaxQB
- (84) IUPHAR
- (85) BioGPS
- (86) Illumina
- (87) COMPARTMENTS
- (88) HOMER
- (89) PaxDb
- (90) ApexBio
- (91) Addgene
- (92) antibodies-online
- (93) CYP
- (94) NONCODE
- (95) TreeFam
- (96) PathCards
- (97) GeneReviews
- (98) GeneTex
- (99) Taconic Biosciences
- (100) GTEx
- (101) ProteomicsDB
- (102) SCBT
- (103) DGIdb
- (104) ClinicalTrials
- (105) RVIS
- (106) SIGNOR
- (107) diseasecard
- (108) NIH Rare Diseases
- (109) Orphanet
- (110) UMLS
- (111) GTR
- (112) Disease Ontology
- (113) Genetics Home Reference
- (114) MeSH
- (115) MedlinePlus
- (116) CDC
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- (118) NCBI Bookshelf
- (119) ClinVar
- (120) Gene Damage Index
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- (122) UDN
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- (125) ENCODE
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- (127) Horizon
- (128) NURSA
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- (131) SNPedia
- (132) BRCA Exchange
- (133) CIViC
- (134) ProteoGenix
- (135) dbSUPER
- (136) TISSUES
- (137) Gene ORGANizer
- (138) abm
- (139) Human Protein Atlas
- (140) GWAS Catalog
- (141) Monarch Initiative
- (142) DataMed
- (143) HumanCyc
- (144) genomics-online
- (145) UCNEbase
- (146) EPDnew
- (147) Applied Biosystems
- (148) GlyConnect
- (149) Aminode
- (150) GeneCopoeia
- (151) GPS-Prot
- (152) RNACentral
- (153) LncRNADisease
- (154) LOVD
- (155) miR2Disease
- (156) DiseaseEnhancer
- (157) Boster Bio
- (158) Biorbyt
- (159) Biocompare
- (160) Mastermind
- (161) CTD^2 Dashboard
- (162) CraniofacialAtlas
- (163) GeneImprint
- (164) Synthego
- (165) Bio Basic
- (166) ENA
- (167) GtRNAdb
- (168) LncBase
- (169) LncBook
- (170) LNCipedia
- (171) LncRNAdb
- (172) Modomics
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- (174) Rfam
- (175) SILVA
- (176) snOPY
- (177) SRPDB
- (178) GENCODE
- (179) TarBase
- (180) MyBioSource