LOC105372609 Gene (RNA Gene)

Uncharacterized LOC105372609

GC20M037686
GIFtS:
1
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Aliases for LOC105372609 Gene

Subcategory (RNA class) for LOC105372609 Gene

ncRNA

Aliases for LOC105372609 Gene

  • Uncharacterized LOC105372609 3

External Ids for LOC105372609 Gene

Previous GeneCards Identifiers for LOC105372609 Gene

  • GC20U900972

Summaries for LOC105372609 Gene

GeneCards Summary for LOC105372609 Gene

LOC105372609 (Uncharacterized LOC105372609) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372609 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372609 Gene

Genomics for LOC105372609 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LOC105372609 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH20J037686 Enhancer 0.5 Ensembl 0.7 +3.7 3707 1.3 ZIC2 OSR2 CREB1 ZSCAN16 FOS JUND EZH2 SP7 VSTM2L LOC105372609 lnc-BLCAP-3 CTNNBL1 LOC100287792 BLCAP
GH20J037688 Enhancer 0.5 Ensembl 0.7 +2.8 2775 0.2 ZIC2 ZNF24 OSR2 ZSCAN16 SP7 LOC105372609 lnc-BLCAP-3 CTNNBL1 LOC100287792 BLCAP
GH20J037679 Enhancer 0.5 Ensembl 0.4 +11.1 11075 1.6 ZNF629 ZNF24 ZBTB17 FOSL1 ATF3 ZNF384 ZBTB6 SP7 VSTM2L ENSG00000204117 LOC100287792 CTNNBL1 LOC105372609 BLCAP
GH20J037681 Enhancer 0.4 Ensembl 0.4 +9.6 9575 0.2 REST RCOR1 MIER2 ENSG00000204117 LOC100287792 LOC105372609 CTNNBL1 BLCAP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372609 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105372609 Gene

Genomic Locations for LOC105372609 Gene
chr20:37,686,042-37,691,276
(GRCh38/hg38)
Size:
5,235 bases
Orientation:
Minus strand

Genomic View for LOC105372609 Gene

Genes around LOC105372609 on UCSC Golden Path with GeneCards custom track
LOC105372609 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105372609 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372609 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC105372609 Gene

Proteins for LOC105372609 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC105372609 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372609 Gene

Domains & Families for LOC105372609 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372609 Gene

Function for LOC105372609 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372609 Gene

Localization for LOC105372609 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372609 Gene

Pathways & Interactions for LOC105372609 Gene

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SuperPathways for LOC105372609 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105372609 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372609 Gene

Drugs & Compounds for LOC105372609 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC105372609 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
LOC105372609 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372609 Gene

No ASD Table

Relevant External Links for LOC105372609 Gene

GeneLoc Exon Structure for
LOC105372609

No data available for mRNA/cDNA for LOC105372609 Gene

Expression for LOC105372609 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372609 Gene

Orthologs for LOC105372609 Gene

No data available for Orthologs and Evolution for LOC105372609 Gene

Paralogs for LOC105372609 Gene

No data available for Paralogs for LOC105372609 Gene

Variants for LOC105372609 Gene

Additional dbSNP identifiers (rs#s) for LOC105372609 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372609 Gene

Disorders for LOC105372609 Gene

No disorders were found for LOC105372609 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372609 Gene

Publications for LOC105372609 Gene

No publications were found for LOC105372609 Gene.

No data available for Mastermind for LOC105372609 Gene

Products for LOC105372609 Gene

Sources for LOC105372609 Gene