Aliases for LOC105372446 Gene

Data sources for LOC105372446 Gene:

Subcategory (RNA class) for LOC105372446 Gene

ncRNA

Aliases for LOC105372446 Gene

External Ids for LOC105372446 Gene

Previous GeneCards Identifiers for LOC105372446 Gene

  • GC19U902121
  • GC19P051395

Summaries for LOC105372446 Gene

GeneCards Summary for LOC105372446 Gene

LOC105372446 (Uncharacterized LOC105372446) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC105372446 include Gastric Cancer.

Additional gene information for LOC105372446 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372446 Gene

Genomics for LOC105372446 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105372446 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J051386 Promoter/Enhancer 1.1 EPDnew ENCODE CraniofacialAtlas 250.7 +0.8 765 1.4 IKZF1 FOXA2 SAP130 ETV4 RARA TEAD3 SOX5 NR2F1 RFX1 NR2F6 HSALNG0127211 LIM2 LOC105372446 C19orf84 NKG7
GH19J051388 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE CraniofacialAtlas 0.7 +3.4 3389 3.2 TBP IKZF1 SMAD5 ZIC2 THAP11 GTF2E2 VEZF1 SMAD4 SAP130 TRIM25 C19orf84 HSALNG0127212 SHANK1 SYT3 IGLON5 LRRC4B LIM2 LOC105372446
GH19J051393 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.4 +7.9 7896 3.5 CHD2 TBP BCL11A MXD4 SP1 MNT IKZF1 SMAD5 ETS1 MBD2 ENSG00000268889 piR-61945-263 ZNF841 ZNF577 ZNF616 ZNF766 ZNF432 ZNF175 ZNF836 ZNF613
GH19J051380 Enhancer 1 Ensembl ENCODE 0.4 -5.9 -5869 1.2 IKZF1 ZNF610 ARNT ZFP91 ZNF316 ADNP FOSL1 PRDM10 NFE2 MLLT1 LIM2 NKG7 LOC105372446 HSALNG0127210
GH19J051406 Enhancer 1 Ensembl ENCODE 0.3 +21.3 21268 5 MNT IKZF1 ZNF217 CTCF REST NBN TRIM22 SAP130 SMC3 RAD21 HSALNG0127214 NKG7 CLDND2 ETFB VSIG10L SIGLEC8 CEACAM18 RPL7P51 SIGLEC14 SIGLEC5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372446 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105372446 Gene

Latest Assembly
chr19:51,386,833-51,412,544
(GRCh38/hg38)
Size:
25,712 bases
Orientation:
Plus strand

Genomic View for LOC105372446 Gene

Genes around LOC105372446 on UCSC Golden Path with GeneCards custom track
LOC105372446 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105372446 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372446 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372446 Gene

Proteins for LOC105372446 Gene

Post-translational modifications for LOC105372446 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372446 Gene

Domains & Families for LOC105372446 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372446 Gene

Function for LOC105372446 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372446 Gene

Localization for LOC105372446 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372446 Gene

Pathways & Interactions for LOC105372446 Gene

PathCards logo

SuperPathways for LOC105372446 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105372446 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372446 Gene

Drugs & Compounds for LOC105372446 Gene

No Compound Related Data Available

Transcripts for LOC105372446 Gene

LOC105372446 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372446 Gene

No ASD Table

Relevant External Links for LOC105372446 Gene

GeneLoc Exon Structure for
LOC105372446

No data available for mRNA/cDNA for LOC105372446 Gene

Expression for LOC105372446 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372446 Gene

Orthologs for LOC105372446 Gene

No data available for Orthologs and Evolution for LOC105372446 Gene

Paralogs for LOC105372446 Gene

No data available for Paralogs for LOC105372446 Gene

Variants for LOC105372446 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105372446 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372446 Gene

Disorders for LOC105372446 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LOC105372446 Gene - From: LNC and COP

Disorder Aliases PubMed IDs
gastric cancer
  • gastric cancer, somatic
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC105372446: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372446 Gene

Publications for LOC105372446 Gene

  1. A Tumor-Specific Prognostic Long Non-Coding RNA Signature in Gastric Cancer. (PMID: 27727196) Ren W … Ying X (Medical science monitor : international medical journal of experimental and clinical research 2016) 74

No data available for Mastermind for LOC105372446 Gene

Products for LOC105372446 Gene

Sources for LOC105372446 Gene