Aliases for LOC105372431 Gene

Subcategory (RNA class) for LOC105372431 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372431 Gene

  • Uncharacterized LOC105372431 3

External Ids for LOC105372431 Gene

Previous GeneCards Identifiers for LOC105372431 Gene

  • GC19U902139

Summaries for LOC105372431 Gene

GeneCards Summary for LOC105372431 Gene

LOC105372431 (Uncharacterized LOC105372431) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372431 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372431 Gene

Genomics for LOC105372431 Gene

GeneHancer (GH) Regulatory Elements for LOC105372431 Gene

Promoters and enhancers for LOC105372431 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J048675 Enhancer 1 ENCODE CraniofacialAtlas 750.6 -0.1 -116 4.5 SIN3A CTCF MYC L3MBTL2 MAX ZNF121 DACH1 RAD21 HDGF TEAD4 LOC105372431 MAMSTR DBP SEC1P RASIP1 IZUMO1 BCAT2 NUCB1 TULP2 NUCB1-AS1
GH19J048680 Enhancer 1 Ensembl ENCODE 0.6 -4.3 -4333 1.6 SMARCE1 MYC L3MBTL2 MAX DACH1 TEAD4 ZFX MLLT1 ZNF639 SP5 IZUMO1 MAMSTR RASIP1 SEC1P DBP BCAT2 NUCB1 TULP2 NUCB1-AS1 LOC105372431
GH19J048672 Promoter 0.3 EPDnew 0.6 +3.8 3780 0.1 NTN5 lnc-CA11-1 LOC105372431 NONHSAG026179.2 SEC1P RF00017-3045
GH19J048674 Enhancer 0.2 ENCODE 0.6 +2.5 2458 0 NTN5 lnc-CA11-1 FUT2 MAMSTR DBP SEC1P RASIP1 IZUMO1 LOC105372431 NONHSAG026179.2
GH19J048676 Enhancer 0.2 Ensembl 0.6 +3.5 3467 0.4 NTN5 lnc-CA11-1 LOC105372431 NONHSAG026179.2 SEC1P RF00017-3045
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372431 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372431 Gene

Genomic Locations for LOC105372431 Gene
chr19:48,673,261-48,677,067
(GRCh38/hg38)
Size:
3,807 bases
Orientation:
Minus strand

Genomic View for LOC105372431 Gene

Genes around LOC105372431 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372431 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372431 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372431 Gene

Proteins for LOC105372431 Gene

Post-translational modifications for LOC105372431 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372431 Gene

Domains & Families for LOC105372431 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372431 Gene

Function for LOC105372431 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372431 Gene

Localization for LOC105372431 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372431 Gene

Pathways & Interactions for LOC105372431 Gene

PathCards logo

SuperPathways for LOC105372431 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105372431 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372431 Gene

Drugs & Compounds for LOC105372431 Gene

No Compound Related Data Available

Transcripts for LOC105372431 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372431 Gene

No ASD Table

Relevant External Links for LOC105372431 Gene

GeneLoc Exon Structure for
LOC105372431

No data available for mRNA/cDNA for LOC105372431 Gene

Expression for LOC105372431 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372431 Gene

Orthologs for LOC105372431 Gene

No data available for Orthologs and Evolution for LOC105372431 Gene

Paralogs for LOC105372431 Gene

No data available for Paralogs for LOC105372431 Gene

Variants for LOC105372431 Gene

Sequence variations from dbSNP and Humsavar for LOC105372431 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000345943 -- 48,675,609(-) A/G non_coding_transcript_variant
rs1000383202 -- 48,675,689(-) C/T intron_variant
rs1000399580 -- 48,675,956(-) T/C intron_variant
rs1000678040 -- 48,674,393(-) C/T intron_variant, non_coding_transcript_variant
rs1000713613 -- 48,674,388(-) G/T intron_variant, non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372431 Gene

Disorders for LOC105372431 Gene

No disorders were found for LOC105372431 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372431 Gene

Publications for LOC105372431 Gene

No publications were found for LOC105372431 Gene.

No data available for External Links for LOC105372431 Gene

Products for LOC105372431 Gene

Sources for LOC105372431 Gene