Aliases for LOC105372396 Gene

Subcategory (RNA class) for LOC105372396 Gene

ncRNA

Aliases for LOC105372396 Gene

  • Uncharacterized LOC105372396 3

External Ids for LOC105372396 Gene

Previous GeneCards Identifiers for LOC105372396 Gene

  • GC19U902020

Summaries for LOC105372396 Gene

GeneCards Summary for LOC105372396 Gene

LOC105372396 (Uncharacterized LOC105372396) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372396 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372396 Gene

Genomics for LOC105372396 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105372396 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J038029 Enhancer 0.6 Ensembl dbSUPER 600.7 -1.0 -1010 0.2 NFE2 BATF ZNF121 LOC105372396 RF00017-2963 lnc-SPINT2-10 SIPA1L3 DPF1
GH19J038026 Enhancer 0.4 Ensembl dbSUPER 600.7 -0.4 -410 0.2 ZNF121 LOC105372396 RF00017-2963 lnc-SPINT2-10 SIPA1L3 DPF1
GH19J038019 Enhancer 1 Ensembl ENCODE dbSUPER 0.7 +4.2 4190 8.6 ZNF143 SCRT2 ZBTB20 NR3C1 USF1 ZBTB17 YY1 HCFC1 ZNF335 BCL6 DPF1 SPINT2 LOC105372396 RF00017-2962 lnc-SPINT2-10 SIPA1L3
GH19J038030 Enhancer 1.4 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 -7.3 -7323 7.6 CREB1 TEAD4 FOXA1 LARP7 ZNF143 PKNOX1 TCF12 REST IKZF2 POLR2A ZNF585B ZNF527 ZNF585A ZFP30 ZNF607 ZNF875 ZNF793 ZNF570 ENSG00000267682 ZNF573
GH19J038043 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.4 -20.0 -19990 6.7 SP1 CTCF POLR2A BACH1 FOXA1 ZNF143 RELA ZIC2 RAD21 TCF12 SIPA1L3 ZNF571 ZNF585B ZNF875 ZNF527 ZNF573 WDR87 ZNF383 ENSG00000267682 ZNF607
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372396 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105372396 Gene

Genomic Locations for LOC105372396 Gene
chr19:38,024,951-38,027,091
(GRCh38/hg38)
Size:
2,141 bases
Orientation:
Minus strand

Genomic View for LOC105372396 Gene

Genes around LOC105372396 on UCSC Golden Path with GeneCards custom track
LOC105372396 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105372396 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372396 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372396 Gene

Proteins for LOC105372396 Gene

Post-translational modifications for LOC105372396 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372396 Gene

Domains & Families for LOC105372396 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372396 Gene

Function for LOC105372396 Gene

Phenotypes From GWAS Catalog for LOC105372396 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372396 Gene

Localization for LOC105372396 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372396 Gene

Pathways & Interactions for LOC105372396 Gene

PathCards logo

SuperPathways for LOC105372396 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105372396 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372396 Gene

Drugs & Compounds for LOC105372396 Gene

No Compound Related Data Available

Transcripts for LOC105372396 Gene

LOC105372396 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372396 Gene

No ASD Table

Relevant External Links for LOC105372396 Gene

GeneLoc Exon Structure for
LOC105372396

No data available for mRNA/cDNA for LOC105372396 Gene

Expression for LOC105372396 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372396 Gene

Orthologs for LOC105372396 Gene

No data available for Orthologs and Evolution for LOC105372396 Gene

Paralogs for LOC105372396 Gene

No data available for Paralogs for LOC105372396 Gene

Variants for LOC105372396 Gene

Additional dbSNP identifiers (rs#s) for LOC105372396 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372396 Gene

Disorders for LOC105372396 Gene

No disorders were found for LOC105372396 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372396 Gene

Publications for LOC105372396 Gene

No publications were found for LOC105372396 Gene.

No data available for Mastermind for LOC105372396 Gene

Products for LOC105372396 Gene

Sources for LOC105372396 Gene