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Aliases for LOC105372395 Gene

Subcategory (RNA class) for LOC105372395 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372395 Gene

  • Uncharacterized LOC105372395 3

External Ids for LOC105372395 Gene

Previous GeneCards Identifiers for LOC105372395 Gene

  • GC19U902127

Summaries for LOC105372395 Gene

GeneCards Summary for LOC105372395 Gene

LOC105372395 (Uncharacterized LOC105372395) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372395 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372395 Gene

Genomics for LOC105372395 Gene

GeneHancer (GH) Regulatory Elements for LOC105372395 Gene

Promoters and enhancers for LOC105372395 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J037855 Promoter 0.6 Ensembl 600.7 -0.5 -477 0.6 ZBTB33 LOC100631378 ENSG00000225868 LOC105372395 ZNF573
GH19J037856 Enhancer 0.4 Ensembl 600.7 +1.1 1124 0.6 ZSCAN4 SCRT2 LOC100631378 LOC105372395 ENSG00000225868 ZNF573 ZNF571-AS1 PIR42352
GH19J037864 Enhancer 0.8 Ensembl 0.4 +9.2 9224 0.8 MZF1 ZNF680 ZNF547 KLF7 ZNF629 ZNF501 POLR2A RBAK ZXDB MYNN ZNF571 ZNF585B ZNF527 ZNF383 ZNF875 ZNF540 ZNF607 LINC01535 ZFP30 ZNF573
GH19J037875 Enhancer 0.8 Ensembl 0.4 +19.5 19524 0.6 CEBPG TFE3 ZNF644 ZNF547 CEBPA GATAD2A RXRB GABPA IRF2 MNT ENSG00000225868 PIR42352 LOC105372395
GH19J037862 Enhancer 0.6 Ensembl 0.4 +7.0 7024 0.4 ZSCAN21 ZNF680 ZNF157 BCL11A ZNF530 ZNF513 ZNF280C ZNF785 ZNF175 ZNF133 ZNF571 ZNF607 ZNF527 ZNF875 ZNF573 ZNF829 ZFP30 ZNF383 ZNF793 ZNF420
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372395 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372395 Gene

Genomic Locations for LOC105372395 Gene
chr19:37,855,777-37,896,673
(GRCh38/hg38)
Size:
40,897 bases
Orientation:
Plus strand

Genomic View for LOC105372395 Gene

Genes around LOC105372395 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372395 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372395 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372395 Gene

Proteins for LOC105372395 Gene

Post-translational modifications for LOC105372395 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372395 Gene

Domains & Families for LOC105372395 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372395 Gene

Function for LOC105372395 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372395 Gene

Localization for LOC105372395 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372395 Gene

Pathways & Interactions for LOC105372395 Gene

PathCards logo

SuperPathways for LOC105372395 Gene

No Data Available

Interacting Proteins for LOC105372395 Gene

Gene Ontology (GO) - Biological Process for LOC105372395 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372395 Gene

Drugs & Compounds for LOC105372395 Gene

No Compound Related Data Available

Transcripts for LOC105372395 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372395 Gene

No ASD Table

Relevant External Links for LOC105372395 Gene

GeneLoc Exon Structure for
LOC105372395

No data available for mRNA/cDNA for LOC105372395 Gene

Expression for LOC105372395 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372395 Gene

Orthologs for LOC105372395 Gene

No data available for Orthologs and Evolution for LOC105372395 Gene

Paralogs for LOC105372395 Gene

No data available for Paralogs for LOC105372395 Gene

Variants for LOC105372395 Gene

Sequence variations from dbSNP and Humsavar for LOC105372395 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs748317096 uncertain-significance, not provided 37,893,639(+) AAAGGAAAGG/AAAGG genic_downstream_transcript_variant, intron_variant
rs763153590 uncertain-significance, not provided 37,886,747(+) CCTTTCCTCCTCCTCCTCCCTTTCCTCCTCCTCCTCCCTTTCCTC/CCTTTCCTCCTCCTCCTCCCTTTCCTC/CCTTTCCTCCTCCTCCTCCCTTTCCTCCTCCTCCTCCCTTTCCTCCTCCTCCTCCCTTTCCTC genic_downstream_transcript_variant, intron_variant
rs765946996 uncertain-significance, not provided 37,893,820(+) C/T genic_downstream_transcript_variant, intron_variant
rs1000073756 -- 37,862,360(+) A/G intron_variant
rs1000176878 -- 37,868,453(+) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372395 Gene

Disorders for LOC105372395 Gene

No disorders were found for LOC105372395 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372395 Gene

Publications for LOC105372395 Gene

No publications were found for LOC105372395 Gene.

No data available for External Links for LOC105372395 Gene

Products for LOC105372395 Gene

Sources for LOC105372395 Gene

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