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Aliases for LOC105372315 Gene

Aliases for LOC105372315 Gene

  • Endogenous Retrovirus Group S71 Member 1 Env Polyprotein 3 3

External Ids for LOC105372315 Gene

Previous GeneCards Identifiers for LOC105372315 Gene

  • GC19U902057

Summaries for LOC105372315 Gene

GeneCards Summary for LOC105372315 Gene

LOC105372315 (Endogenous Retrovirus Group S71 Member 1 Env Polyprotein) is a Protein Coding gene.

Additional gene information for LOC105372315 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372315 Gene

Genomics for LOC105372315 Gene

GeneHancer (GH) Regulatory Elements for LOC105372315 Gene

Promoters and enhancers for LOC105372315 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J020361 Enhancer 0.4 ENCODE 650.7 +1.9 1946 0.2 CTCF FOS LOC105372315 PIR47337 PIR36651 ZNF826P
GH19J020367 Enhancer 0.8 FANTOM5 ENCODE 0.4 +10.0 10031 0.8 CTCF MXI1 RFX1 POLR2A BACH1 SIN3A MAFK ZNF682 ZNF737 PIR36651 BNIP3P21 LOC105372315 ZNF826P
GH19J020360 Enhancer 0.3 ENCODE 0.7 +2.3 2326 0.2 CTCF PIR47337 LOC105372315 PIR36651 ZNF826P
GH19J020369 Enhancer 0.2 FANTOM5 0.4 +11.4 11352 0.3 PIR36651 LOC105372315 BNIP3P21 ZNF826P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372315 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372315 Gene

Genomic Locations for LOC105372315 Gene
chr19:20,358,181-20,371,817
(GRCh38/hg38)
Size:
13,637 bases
Orientation:
Plus strand

Genomic View for LOC105372315 Gene

Genes around LOC105372315 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372315 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372315 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372315 Gene

Proteins for LOC105372315 Gene

Post-translational modifications for LOC105372315 Gene

No Post-translational modifications

Other Protein References for LOC105372315 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC105372315 Gene

Domains & Families for LOC105372315 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372315 Gene

Function for LOC105372315 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372315 Gene

Localization for LOC105372315 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372315 Gene

Pathways & Interactions for LOC105372315 Gene

SuperPathways for LOC105372315 Gene

No Data Available

Interacting Proteins for LOC105372315 Gene

Gene Ontology (GO) - Biological Process for LOC105372315 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372315 Gene

Drugs & Compounds for LOC105372315 Gene

No Compound Related Data Available

Transcripts for LOC105372315 Gene

mRNA/cDNA for LOC105372315 Gene

(2) REFSEQ mRNAs :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372315 Gene

No ASD Table

Relevant External Links for LOC105372315 Gene

GeneLoc Exon Structure for
LOC105372315

Expression for LOC105372315 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372315 Gene

Orthologs for LOC105372315 Gene

No data available for Orthologs and Evolution for LOC105372315 Gene

Paralogs for LOC105372315 Gene

No data available for Paralogs for LOC105372315 Gene

Variants for LOC105372315 Gene

Sequence variations from dbSNP and Humsavar for LOC105372315 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000621712 -- 20,363,808(+) C/G intron_variant
rs1000821718 -- 20,368,433(+) A/G intron_variant
rs1001222569 -- 20,367,858(+) G/A intron_variant
rs1002134843 -- 20,364,318(+) A/G intron_variant
rs1002531272 -- 20,364,549(+) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372315 Gene

Disorders for LOC105372315 Gene

No disorders were found for LOC105372315 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372315 Gene

Publications for LOC105372315 Gene

No publications were found for LOC105372315 Gene.

Products for LOC105372315 Gene

Sources for LOC105372315 Gene

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