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Aliases for LOC105372310 Gene

Subcategory (RNA class) for LOC105372310 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372310 Gene

  • Uncharacterized LOC105372310 3
  • CTC-260E6.6 3

External Ids for LOC105372310 Gene

Previous GeneCards Identifiers for LOC105372310 Gene

  • GC19U902180
  • GC19M020405
  • GC19M021137
  • GC19M021361
  • GC19M021538
  • GC19M021727
  • GC19M021926
  • GC19M022120

Summaries for LOC105372310 Gene

GeneCards Summary for LOC105372310 Gene

LOC105372310 (Uncharacterized LOC105372310) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372310 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372310 Gene

Genomics for LOC105372310 Gene

GeneHancer (GH) Regulatory Elements for LOC105372310 Gene

Promoters and enhancers for LOC105372310 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J020237 Promoter/Enhancer 1.1 Ensembl ENCODE 650.7 +0.6 585 2.4 MEIS2 MXI1 PKNOX1 DDX20 SIN3A SP1 GATA3 POLR2A PBX2 NFYB LOC105372310 LOC102724427 LOC284441 ZNF682 ENSG00000280079 ENSG00000267383
GH19J020166 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 0.2 +71.5 71525 2.1 GTF2F1 MEIS2 SOX13 MXI1 PKNOX1 SAP130 SIN3A CEBPG ETS1 POLR2A ZNF486 BNIP3P15 BNIP3P16 LOC105372310 ENSG00000267383
GH19J020232 Enhancer 0.6 ENCODE 0.4 +5.1 5135 1.9 L3MBTL2 MTA2 BHLHE40 TAL1 CBFA2T3 DPF2 FOXA1 TCF12 CTBP1 NCOR1 BNIP3P17 LOC102724427 BNIP3P15 LOC105372310 ENSG00000280079 ENSG00000267383
GH19J020248 Enhancer 0.4 ENCODE 0.4 -8.4 -8407 0.2 CTCF RAD21 LOC102724427 LOC105372310 ENSG00000267383
GH19J020226 Enhancer 0.4 FANTOM5 0.4 +11.9 11880 0.2 ATF2 ZNF486 ZNF90 ZNF93 ZNF682 ENSG00000280079 LOC105372310 ENSG00000267383
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372310 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372310 Gene

Genomic Locations for LOC105372310 Gene
chr19:20,125,491-20,238,810
(GRCh38/hg38)
Size:
113,320 bases
Orientation:
Minus strand
chr19:19,862,994-19,863,025
(GRCh37/hg19)
Size:
32 bases
Orientation:
Minus strand

Genomic View for LOC105372310 Gene

Genes around LOC105372310 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372310 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372310 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372310 Gene

Proteins for LOC105372310 Gene

Post-translational modifications for LOC105372310 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372310 Gene

Domains & Families for LOC105372310 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372310 Gene

Function for LOC105372310 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372310 Gene

Localization for LOC105372310 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372310 Gene

Pathways & Interactions for LOC105372310 Gene

SuperPathways for LOC105372310 Gene

No Data Available

Interacting Proteins for LOC105372310 Gene

Gene Ontology (GO) - Biological Process for LOC105372310 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372310 Gene

Drugs & Compounds for LOC105372310 Gene

No Compound Related Data Available

Transcripts for LOC105372310 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372310 Gene

No ASD Table

Relevant External Links for LOC105372310 Gene

GeneLoc Exon Structure for
LOC105372310

No data available for mRNA/cDNA for LOC105372310 Gene

Expression for LOC105372310 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372310 Gene

Orthologs for LOC105372310 Gene

No data available for Orthologs and Evolution for LOC105372310 Gene

Paralogs for LOC105372310 Gene

No data available for Paralogs for LOC105372310 Gene

Variants for LOC105372310 Gene

Sequence variations from dbSNP and Humsavar for LOC105372310 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000010977 -- 20,144,513(-) A/T genic_downstream_transcript_variant, intron_variant
rs1000018530 -- 20,257,390(-) T/C genic_upstream_transcript_variant, intron_variant
rs1000020134 -- 20,219,335(-) C/T genic_downstream_transcript_variant, intron_variant
rs1000055327 -- 20,204,294(-) T/G genic_downstream_transcript_variant, intron_variant
rs1000075946 -- 20,218,923(-) G/C genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372310 Gene

Disorders for LOC105372310 Gene

Additional Disease Information for LOC105372310

No disorders were found for LOC105372310 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105372310 Gene

Publications for LOC105372310 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for LOC105372310 Gene

Sources for LOC105372310 Gene

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