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Aliases for LOC105372284 Gene

Subcategory (RNA class) for LOC105372284 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372284 Gene

  • Uncharacterized LOC105372284 3

External Ids for LOC105372284 Gene

Previous GeneCards Identifiers for LOC105372284 Gene

  • GC19U902174

Summaries for LOC105372284 Gene

GeneCards Summary for LOC105372284 Gene

LOC105372284 (Uncharacterized LOC105372284) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372284 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372284 Gene

Genomics for LOC105372284 Gene

GeneHancer (GH) Regulatory Elements for LOC105372284 Gene

Promoters and enhancers for LOC105372284 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J013729 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.4 -6.6 -6631 3.1 PKNOX1 CLOCK ARID4B SIN3A ZNF2 IRF4 YY1 POLR2B ZNF213 ZNF207 CCDC130 MRI1 CACNA1A LOC105372284
GH19J013718 Enhancer 0.8 ENCODE 0.4 +6.9 6872 0.2 HDAC1 PKNOX1 ATF1 TCF12 GATA2 EGR1 CREM PHF21A NFIC KLF16 ADGRL1 NANOS3 TNPO2 PIR44447 LOC105372284 GC19P013702
GH19J013717 Enhancer 0.7 ENCODE 0.4 +7.2 7160 0.2 LEF1 ATF1 TAL1 ZKSCAN1 FOSL1 TCF12 CTBP1 GATA2 ZNF157 NCOR1 ADGRL1 NANOS3 TNPO2 PIR44447 LOC105372284 GC19P013702
GH19J013692 Enhancer 0.4 ENCODE 0.3 +32.2 32242 0.1 JUND TAL1 GC19P013685 GC19P013702 LOC105372284
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372284 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372284 Gene

Genomic Locations for LOC105372284 Gene
chr19:13,684,209-13,724,394
(GRCh38/hg38)
Size:
40,186 bases
Orientation:
Minus strand

Genomic View for LOC105372284 Gene

Genes around LOC105372284 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372284 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372284 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372284 Gene

Proteins for LOC105372284 Gene

Post-translational modifications for LOC105372284 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372284 Gene

Domains & Families for LOC105372284 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372284 Gene

Function for LOC105372284 Gene

Phenotypes From GWAS Catalog for LOC105372284 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372284 Gene

Localization for LOC105372284 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372284 Gene

Pathways & Interactions for LOC105372284 Gene

SuperPathways for LOC105372284 Gene

No Data Available

Interacting Proteins for LOC105372284 Gene

Gene Ontology (GO) - Biological Process for LOC105372284 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372284 Gene

Drugs & Compounds for LOC105372284 Gene

No Compound Related Data Available

Transcripts for LOC105372284 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372284 Gene

No ASD Table

Relevant External Links for LOC105372284 Gene

GeneLoc Exon Structure for
LOC105372284

No data available for mRNA/cDNA for LOC105372284 Gene

Expression for LOC105372284 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372284 Gene

Orthologs for LOC105372284 Gene

No data available for Orthologs and Evolution for LOC105372284 Gene

Paralogs for LOC105372284 Gene

No data available for Paralogs for LOC105372284 Gene

Variants for LOC105372284 Gene

Sequence variations from dbSNP and Humsavar for LOC105372284 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000018128 -- 13,721,116(-) G/A/T genic_upstream_transcript_variant, intron_variant
rs1000035076 -- 13,719,524(-) G/A genic_upstream_transcript_variant, intron_variant
rs1000066785 -- 13,709,060(-) GGGGGG/GGGGG/GGGGGGG intron_variant
rs1000078176 -- 13,702,080(-) C/T genic_downstream_transcript_variant, intron_variant
rs1000181049 -- 13,713,202(-) A/G intron_variant, non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372284 Gene

Disorders for LOC105372284 Gene

No disorders were found for LOC105372284 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372284 Gene

Publications for LOC105372284 Gene

No publications were found for LOC105372284 Gene.

Products for LOC105372284 Gene

Sources for LOC105372284 Gene

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