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Aliases for LOC105372281 Gene

Subcategory (RNA class) for LOC105372281 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372281 Gene

  • Uncharacterized LOC105372281 3
  • CTD-2265O21.3 3

External Ids for LOC105372281 Gene

Previous GeneCards Identifiers for LOC105372281 Gene

  • GC19U901906

Summaries for LOC105372281 Gene

GeneCards Summary for LOC105372281 Gene

LOC105372281 (Uncharacterized LOC105372281) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372281 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372281 Gene

Genomics for LOC105372281 Gene

GeneHancer (GH) Regulatory Elements for LOC105372281 Gene

Promoters and enhancers for LOC105372281 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J012825 Promoter/Enhancer 1.4 Ensembl ENCODE 600.7 -1.0 -963 1.4 ZFX ELF3 ZNF148 AHR NCOA6 TRIM24 PPARG SP5 KLF14 EGR1 GC19M012832 ENSG00000267424 LOC105372281 PRDX2 BEST2 GCDH RTBDN HOOK2
GH19J012828 Promoter/Enhancer 1.2 Ensembl ENCODE 600.7 +1.9 1889 0.3 SP7 SP5 ZNF600 ZEB2 PATZ1 ZNF341 KLF9 SP2 EGR1 ZBTB48 GC19M012832 LOC105372281 ENSG00000267424 RTBDN MAST1 HOOK2
GH19J012830 Promoter/Enhancer 1.2 EPDnew ENCODE 0.7 +3.9 3883 0.1 MLLT1 EGR1 REST KLF9 SP2 ZNF184 SAP130 ZNF207 ZFHX2 NCOA1 RTBDN MAST1 LOC105372281 GC19M012832 ENSG00000267424 HOOK2
GH19J012834 Promoter/Enhancer 1.6 Ensembl ENCODE 0.4 +5.9 5869 0.7 CC2D1A CTCF ELF3 ZKSCAN8 MNT ZNF148 NKRF MLLT1 CEBPG GTF2F1 MAST1 CCDC130 ZNF564 WDR83OS ZNF791 DNASE2 MRI1 ZNF700 ZNF44 TRMT1
GH19J012831 Promoter 0.5 EPDnew 0.7 +3.6 3554 0.1 RTBDN LOC105372281 MAST1 GC19M012832 ENSG00000267424 HOOK2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372281 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372281 Gene

Genomic Locations for LOC105372281 Gene
chr19:12,826,785-12,833,089
(GRCh38/hg38)
Size:
6,305 bases
Orientation:
Plus strand

Genomic View for LOC105372281 Gene

Genes around LOC105372281 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372281 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372281 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372281 Gene

Proteins for LOC105372281 Gene

Post-translational modifications for LOC105372281 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372281 Gene

Domains & Families for LOC105372281 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372281 Gene

Function for LOC105372281 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372281 Gene

Localization for LOC105372281 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372281 Gene

Pathways & Interactions for LOC105372281 Gene

PathCards logo

SuperPathways for LOC105372281 Gene

No Data Available

Interacting Proteins for LOC105372281 Gene

Gene Ontology (GO) - Biological Process for LOC105372281 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372281 Gene

Drugs & Compounds for LOC105372281 Gene

No Compound Related Data Available

Transcripts for LOC105372281 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372281 Gene

No ASD Table

Relevant External Links for LOC105372281 Gene

GeneLoc Exon Structure for
LOC105372281

No data available for mRNA/cDNA for LOC105372281 Gene

Expression for LOC105372281 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372281 Gene

Orthologs for LOC105372281 Gene

No data available for Orthologs and Evolution for LOC105372281 Gene

Paralogs for LOC105372281 Gene

No data available for Paralogs for LOC105372281 Gene

Variants for LOC105372281 Gene

Sequence variations from dbSNP and Humsavar for LOC105372281 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000568610 -- 12,830,590(+) C/T intron_variant
rs1000667526 -- 12,830,942(+) TGTGTGTGTGT/TGTGTGTGTGTGT intron_variant
rs1001122229 -- 12,831,213(+) T/A intron_variant
rs1001232541 -- 12,833,283(+) G/A downstream_transcript_variant
rs1002083118 -- 12,826,749(+) C/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372281 Gene

Disorders for LOC105372281 Gene

No disorders were found for LOC105372281 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372281 Gene

Publications for LOC105372281 Gene

No publications were found for LOC105372281 Gene.

No data available for External Links for LOC105372281 Gene

Products for LOC105372281 Gene

Sources for LOC105372281 Gene

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