Aliases for LOC105372273 Gene
Subcategory (RNA class) for LOC105372273 Gene
ncRNA
Quality Score for this RNA gene is
2
External Ids for LOC105372273 Gene
- Entrez Gene: 105372273
- Ensembl: ENSG00000267082
Previous GeneCards Identifiers for LOC105372273 Gene
- GC19U902142
Summaries for LOC105372273 Gene
GeneCards Summary for LOC105372273 Gene
LOC105372273 (Uncharacterized LOC105372273) is an RNA Gene, and is affiliated with the ncRNA class.
Additional gene information for LOC105372273 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372273 Gene
Genomics for LOC105372273 Gene
GeneHancer (GH) Regulatory Elements for LOC105372273 Gene
Promoters and enhancers for LOC105372273 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH19I011202 | Enhancer | 1.3 | Ensembl ENCODE dbSUPER | 555.8 | +0.1 | 82 | 3.1 | KLF17 ZNF48 RAD21 RARA GATA2 ARID2 ZNF143 FOS RUNX3 SMARCA5 | LOC105372273 ANGPTL8 DOCK6 KANK2 GC19P011210 | |
| GH19I011192 | Promoter/Enhancer | 2.4 | EPDnew Ensembl ENCODE dbSUPER | 5.6 | -7.4 | -7384 | 7.1 | HDGF ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF213 ZNF143 SP3 REST | KANK2 LOC105372273 ENSG00000267174 GC19P011173 DOCK6 | |
| GH19I011172 | Enhancer | 0.4 | dbSUPER | 5.3 | -30.0 | -29996 | 3.2 | ARHGAP35 ZFP36 | GC19P011173 KANK2 LOC105372273 DOCK6 | |
| GH19I011200 | Enhancer | 0.3 | dbSUPER | 6 | -2.4 | -2378 | 1.2 | GLIS2 | LOC105372273 KANK2 DOCK6 | |
| GH19I011209 | Enhancer | 0.8 | dbSUPER | 0.4 | +6.5 | 6495 | 1.5 | HDAC1 ZSCAN5A ZSCAN26 ZNF514 BCL11B ZEB1 CTBP1 ZNF23 ZNF366 ZBTB48 | ENSG00000279807 GC19P011210 ILF3 ZNF627 ZNF441 ZNF625 ZNF136 ZNF844 ENSG00000242615 ZNF788 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around LOC105372273 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for LOC105372273 Gene
Genomic Locations for LOC105372273 Gene
- chr19:11,203,628-11,216,176
- (GRCh38/hg38)
- Size:
- 12,549 bases
- Orientation:
- Plus strand
- chr19:11,314,304-11,326,844
- (GRCh37/hg19)
Genomic View for LOC105372273 Gene
Genes around LOC105372273 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 19p13.2 by Ensembl
- 19p13.2 by Entrez Gene
LOC105372273 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC105372273 Gene
Proteins for LOC105372273 Gene
Post-translational modifications for LOC105372273 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for LOC105372273
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105372273
- Origene Custom Protein Services for LOC105372273
- Search GeneTex for Proteins for LOC105372273
No data available for DME Specific Peptides for LOC105372273 Gene
Domains & Families for LOC105372273 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372273 Gene
Function for LOC105372273 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for LOC105372273
-
- Search ViGene Biosciences for LOC105372273
CRISPR Products
- Browse CRISPR knockouts for LOC105372273
miRNA Products
- Search ViGene Biosciences for LOC105372273
Inhibitory RNA Products
- Search ViGene Biosciences for LOC105372273
Clone Products
- GenScript: Custom all cDNA clones Services for LOC105372273
- VectorBuilder custom plasmid, inducible vectors for LOC105372273
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LOC105372273
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372273 Gene
Localization for LOC105372273 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372273 Gene
Transcripts for LOC105372273 Gene
mRNA/cDNA for LOC105372273 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for LOC105372273
miRNA Products
- Search ViGene Biosciences for LOC105372273
Inhibitory RNA Products
- Search ViGene Biosciences for LOC105372273
Clone Products
- GenScript: Custom all cDNA clones Services for LOC105372273
- VectorBuilder custom plasmid, inducible vectors for LOC105372273
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LOC105372273
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Relevant External Links for LOC105372273 Gene
- GeneLoc Exon Structure for
- LOC105372273
Expression for LOC105372273 Gene
No Expression Related Data Available
Primer Products
Gene Expression Assay Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372273 Gene
Orthologs for LOC105372273 Gene
Evolution for LOC105372273 Gene
- ENSEMBL:
- Gene Tree for LOC105372273 (if available)
- TreeFam:
- Gene Tree for LOC105372273 (if available)
No data available for Orthologs for LOC105372273 Gene
Paralogs for LOC105372273 Gene
No data available for Paralogs for LOC105372273 Gene
Variants for LOC105372273 Gene
| SNP ID | Clin | Chr 19 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs200472954 | likely-pathogenic, Adams-Oliver syndrome 2 | 11,213,198(+) | C/T | intron_variant | |
| rs397509399 | pathogenic, Adams-Oliver syndrome 2 | 11,214,650(+) | C/G | intron_variant | |
| rs112911897 | likely-benign, not provided | 11,215,909(+) | G/A | intron_variant | |
| rs147554257 | likely-benign, not provided | 11,214,408(+) | G/A | intron_variant | |
| rs377755210 | likely-benign, not specified | 11,212,095(+) | C/T | intron_variant |
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372273 Gene
Disorders for LOC105372273 Gene
Additional Disease Information for LOC105372273
No disorders were found for LOC105372273 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105372273 Gene
Publications for LOC105372273 Gene
- Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
Products for LOC105372273 Gene
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- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105372273
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- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for LOC105372273
- VectorBuilder custom plasmid, inducible vectors for LOC105372273
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LOC105372273
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for LOC105372273
- Search GeneTex for Proteins for LOC105372273
- Search ViGene Biosciences for LOC105372273
Sources for LOC105372273 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
