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Aliases for LOC105372266 Gene

Subcategory (RNA class) for LOC105372266 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372266 Gene

  • Uncharacterized LOC105372266 3
  • AC008946.1 5

External Ids for LOC105372266 Gene

Previous GeneCards Identifiers for LOC105372266 Gene

  • GC19U902001

Summaries for LOC105372266 Gene

GeneCards Summary for LOC105372266 Gene

LOC105372266 (Uncharacterized LOC105372266) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372266 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372266 Gene

Genomics for LOC105372266 Gene

GeneHancer (GH) Regulatory Elements for LOC105372266 Gene

Promoters and enhancers for LOC105372266 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J008003 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 8.7 -3.1 -3053 3.3 PKNOX1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 POLR2B ZNF207 ELAVL1 GC19P008006 ZNF557 XAB2 HNRNPM ZNF558 MAP2K7 ZNF414 LOC105372266 CCL25
GH19J007924 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE 7 -80.5 -80462 6.3 PKNOX1 SMAD1 ARID4B SIN3A SLC30A9 POLR2B E2F8 ZNF143 FOS SP3 ENSG00000269139 CTXN1 TIMM44 LOC105372266
GH19J008000 Enhancer 1.4 Ensembl ENCODE dbSUPER 8.2 -6.6 -6601 2.7 HDGF PKNOX1 SMAD1 ATF1 ARID4B SIN3A DMAP1 ZNF48 YY1 ZNF143 ENSG00000269139 LOC105372266 ELAVL1 GC19P007992
GH19J008032 Enhancer 1.2 Ensembl ENCODE 6.4 +26.7 26655 5.7 HDGF PKNOX1 ATF1 ARNT NCOA2 TCF12 POLR2B ZNF766 GATA2 E2F8 HNRNPM ZNF558 XAB2 ZNF557 ELAVL1 MAP2K7 TIMM44 ZNF414 ENSG00000269139 CCL25
GH19J007986 Enhancer 0.9 FANTOM5 ENCODE dbSUPER 8 -21.4 -21384 1 JUND ZNF24 FOSL2 FOS BATF LOC105372266 PIR52412 GC19P007992 ELAVL1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372266 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372266 Gene

Genomic Locations for LOC105372266 Gene
chr19:8,008,390-8,016,025
(GRCh38/hg38)
Size:
7,636 bases
Orientation:
Plus strand
chr19:8,073,613-8,080,909
(GRCh37/hg19)
Size:
7,297 bases
Orientation:
Plus strand

Genomic View for LOC105372266 Gene

Genes around LOC105372266 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372266 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372266 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372266 Gene

Proteins for LOC105372266 Gene

Post-translational modifications for LOC105372266 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372266 Gene

Domains & Families for LOC105372266 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372266 Gene

Function for LOC105372266 Gene

Phenotypes From GWAS Catalog for LOC105372266 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372266 Gene

Localization for LOC105372266 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372266 Gene

Pathways & Interactions for LOC105372266 Gene

SuperPathways for LOC105372266 Gene

No Data Available

Interacting Proteins for LOC105372266 Gene

Gene Ontology (GO) - Biological Process for LOC105372266 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372266 Gene

Drugs & Compounds for LOC105372266 Gene

No Compound Related Data Available

Transcripts for LOC105372266 Gene

mRNA/cDNA for LOC105372266 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372266 Gene

No ASD Table

Relevant External Links for LOC105372266 Gene

GeneLoc Exon Structure for
LOC105372266

Expression for LOC105372266 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372266 Gene

Orthologs for LOC105372266 Gene

Evolution for LOC105372266 Gene

ENSEMBL:
Gene Tree for LOC105372266 (if available)
TreeFam:
Gene Tree for LOC105372266 (if available)

No data available for Orthologs for LOC105372266 Gene

Paralogs for LOC105372266 Gene

No data available for Paralogs for LOC105372266 Gene

Variants for LOC105372266 Gene

Sequence variations from dbSNP and Humsavar for LOC105372266 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000475458 -- 8,011,550(+) A/G intron_variant
rs1000846105 -- 8,011,326(+) A/G intron_variant
rs1001478932 -- 8,008,184(+) A/T upstream_transcript_variant
rs1001529998 -- 8,008,002(+) G/A upstream_transcript_variant
rs1001679725 -- 8,010,739(+) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372266 Gene

Disorders for LOC105372266 Gene

No disorders were found for LOC105372266 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372266 Gene

Publications for LOC105372266 Gene

No publications were found for LOC105372266 Gene.

Products for LOC105372266 Gene

Sources for LOC105372266 Gene

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