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Aliases for LOC105372250 Gene

Subcategory (RNA class) for LOC105372250 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105372250 Gene

  • Uncharacterized LOC105372250 3

External Ids for LOC105372250 Gene

Previous GeneCards Identifiers for LOC105372250 Gene

  • GC19U902080
  • GC19P004734
  • GC19P004736
  • GC19P004738
  • GC19P004740
  • GC19P004744
  • GC19P004746

Summaries for LOC105372250 Gene

GeneCards Summary for LOC105372250 Gene

LOC105372250 (Uncharacterized LOC105372250) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372250 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372250 Gene

Genomics for LOC105372250 Gene

GeneHancer (GH) Regulatory Elements for LOC105372250 Gene

Promoters and enhancers for LOC105372250 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I004721 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 550.8 +1.2 1161 4.5 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 ZNF548 SP3 NFYC ZFP41 DPP9 GC19P004749 GC19M004737 LOC105372250 TRG-TCC1-1 TRV-CAC3-1 PTPRS SAFB2 SAFB SNRPEP4
GH19I004722 Enhancer 0.2 ENCODE 550.8 -1.6 -1555 0 LOC105372250 DPP9 GC19M004658
GH19I004719 Enhancer 0.8 ENCODE 0.8 -2.8 -2848 1.4 ZNF529 ZFP64 MZF1 BATF IRF4 ZNF213 ZNF354C ZNF138 ZNF202 ZNF680 SNRPEP4 ENSG00000267030 CCDC94 SAFB ENSG00000267769 APBA3 ENSG00000269807 SAFB2 PTPRS DPP9-AS1
GH19I004706 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -13.8 -13830 4.9 FOXA2 NEUROD1 NFXL1 RAD21 RARA YY1 RXRA ELF1 REST NR2F2 DPP9 LOC105372250 GC19M004658
GH19I004711 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -9.5 -9544 3.2 MXI1 JUN SIN3A MAX BRCA1 RAD21 YY1 POLR2A SMC3 RCOR1 LOC105372250 DPP9 GC19M004658
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372250 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372250 Gene

Genomic Locations for LOC105372250 Gene
chr19:4,722,942-4,725,174
(GRCh38/hg38)
Size:
2,233 bases
Orientation:
Plus strand
chr19:4,724,081-4,724,153
(GRCh37/hg19)

Genomic View for LOC105372250 Gene

Genes around LOC105372250 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372250 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372250 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372250 Gene

Proteins for LOC105372250 Gene

Post-translational modifications for LOC105372250 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372250 Gene

Domains & Families for LOC105372250 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372250 Gene

Function for LOC105372250 Gene

Phenotypes From GWAS Catalog for LOC105372250 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372250 Gene

Localization for LOC105372250 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372250 Gene

Pathways & Interactions for LOC105372250 Gene

SuperPathways for LOC105372250 Gene

No Data Available

Interacting Proteins for LOC105372250 Gene

Gene Ontology (GO) - Biological Process for LOC105372250 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372250 Gene

Drugs & Compounds for LOC105372250 Gene

No Compound Related Data Available

Transcripts for LOC105372250 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372250 Gene

No ASD Table

Relevant External Links for LOC105372250 Gene

GeneLoc Exon Structure for
LOC105372250

No data available for mRNA/cDNA for LOC105372250 Gene

Expression for LOC105372250 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372250 Gene

Orthologs for LOC105372250 Gene

No data available for Orthologs and Evolution for LOC105372250 Gene

Paralogs for LOC105372250 Gene

No data available for Paralogs for LOC105372250 Gene

Variants for LOC105372250 Gene

Sequence variations from dbSNP and Humsavar for LOC105372250 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000084817 -- 4,722,592(+) G/A upstream_transcript_variant
rs1000196516 -- 4,724,171(+) T/C genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000692016 -- 4,721,313(+) T/C upstream_transcript_variant
rs1000940978 -- 4,724,125(+) G/A genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1001041292 -- 4,721,065(+) C/A/G upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372250 Gene

Disorders for LOC105372250 Gene

No disorders were found for LOC105372250 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372250 Gene

Publications for LOC105372250 Gene

No publications were found for LOC105372250 Gene.

Products for LOC105372250 Gene

Sources for LOC105372250 Gene

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