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Aliases for LOC105372246 Gene

Subcategory (RNA class) for LOC105372246 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372246 Gene

  • Uncharacterized LOC105372246 3

External Ids for LOC105372246 Gene

Previous GeneCards Identifiers for LOC105372246 Gene

  • GC19U901958

Summaries for LOC105372246 Gene

GeneCards Summary for LOC105372246 Gene

LOC105372246 (Uncharacterized LOC105372246) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372246 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372246 Gene

Genomics for LOC105372246 Gene

GeneHancer (GH) Regulatory Elements for LOC105372246 Gene

Promoters and enhancers for LOC105372246 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J003477 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE dbSUPER 650.7 -1.6 -1572 4.9 HDGF ARID4B DMAP1 SLC30A9 SP3 RXRA SP5 NCOA1 NFYC MXD4 SMIM24 LOC105372246 CACTIN-AS1 APBA3 CACTIN ZNF77 ENSG00000269807 MFSD12 ENSG00000267030 ENSG00000267139
GH19J003483 Enhancer 0.5 ENCODE dbSUPER 650.7 +1.6 1593 0.2 EGR2 ENSG00000284638 LOC105372246 GC19P003497
GH19J003482 Enhancer 0.5 ENCODE dbSUPER 650.7 +1.1 1124 0.2 NFIC ENSG00000284638 LOC105372246
GH19J003484 Enhancer 0.8 FANTOM5 0.7 +3.2 3221 0.4 BCOR CTCF PTBP1 ZMYM3 ZNF384 ZBTB7B RAD21 ZFHX2 PATZ1 VEZF1 ENSG00000284638 CACTIN ZNF77 YJU2 DOHH CACTIN-AS1 LOC105372246 GC19P003497
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372246 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372246 Gene

Genomic Locations for LOC105372246 Gene
chr19:3,481,894-3,490,729
(GRCh38/hg38)
Size:
8,836 bases
Orientation:
Plus strand

Genomic View for LOC105372246 Gene

Genes around LOC105372246 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372246 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372246 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372246 Gene

Proteins for LOC105372246 Gene

Post-translational modifications for LOC105372246 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372246 Gene

Domains & Families for LOC105372246 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372246 Gene

Function for LOC105372246 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372246 Gene

Localization for LOC105372246 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372246 Gene

Pathways & Interactions for LOC105372246 Gene

SuperPathways for LOC105372246 Gene

No Data Available

Interacting Proteins for LOC105372246 Gene

Gene Ontology (GO) - Biological Process for LOC105372246 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372246 Gene

Drugs & Compounds for LOC105372246 Gene

No Compound Related Data Available

Transcripts for LOC105372246 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372246 Gene

No ASD Table

Relevant External Links for LOC105372246 Gene

GeneLoc Exon Structure for
LOC105372246

No data available for mRNA/cDNA for LOC105372246 Gene

Expression for LOC105372246 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372246 Gene

Orthologs for LOC105372246 Gene

No data available for Orthologs and Evolution for LOC105372246 Gene

Paralogs for LOC105372246 Gene

No data available for Paralogs for LOC105372246 Gene

Variants for LOC105372246 Gene

Sequence variations from dbSNP and Humsavar for LOC105372246 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000117459 -- 3,490,724(+) G/A non_coding_transcript_variant
rs1000237971 -- 3,482,324(+) G/T intron_variant, non_coding_transcript_variant
rs1000287354 -- 3,482,229(+) C/T non_coding_transcript_variant
rs1000337409 -- 3,488,381(+) C/T intron_variant
rs1000389793 -- 3,488,020(+) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372246 Gene

Disorders for LOC105372246 Gene

No disorders were found for LOC105372246 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372246 Gene

Publications for LOC105372246 Gene

No publications were found for LOC105372246 Gene.

Products for LOC105372246 Gene

Sources for LOC105372246 Gene

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