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Aliases for LOC105372232 Gene

Subcategory (RNA class) for LOC105372232 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105372232 Gene

  • Uncharacterized LOC105372232 3
  • AC005775.1 5

External Ids for LOC105372232 Gene

Previous GeneCards Identifiers for LOC105372232 Gene

  • GC19U902161

Summaries for LOC105372232 Gene

GeneCards Summary for LOC105372232 Gene

LOC105372232 (Uncharacterized LOC105372232) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372232 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372232 Gene

Genomics for LOC105372232 Gene

GeneHancer (GH) Regulatory Elements for LOC105372232 Gene

Promoters and enhancers for LOC105372232 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I000506 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 550.8 +0.2 238 2.7 PKNOX1 FOXA2 SMAD1 MLX ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 TPGS1 LOC105372232 DAZAP1 MIER2 MADCAM1 C2CD4C
GH19I001382 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 27.5 -876.2 -876193 2.2 MLX FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 NDUFS7 PIR43938 TRF-GAA1-6 TRN-GTT2-6 PIR60227 CIRBP SF3A2 TMEM259 MUM1 TCF3
GH19I001019 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 19 -513.4 -513374 4.4 MLX ZFP64 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF416 ZNF143 TMEM259 RNU6-2 GC19P001025 TCF3 LOC100288123 DAZAP1 GRIN3B PTBP1 CIRBP MED16
GH19I000487 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 13.8 +19.0 18989 2.7 HDGF SMAD1 ARNT ARID4B SIN3A POLR2B ZNF766 ZNF207 ZNF143 SP3 MADCAM1 DAZAP1 TMEM259 SHC2 LOC105372232 MIER2 PTBP1 MED16 ENSG00000267317 RNF126
GH19I001202 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 10.3 -698.9 -698924 8 ZFP64 FEZF1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 NFYC ZC3H11A STK11 CIRBP TMEM259 DAZAP1 LOC100288123 TCF3 PTBP1 GRIN3B DOT1L ENSG00000267317
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372232 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372232 Gene

Genomic Locations for LOC105372232 Gene
chr19:490,046-507,833
(GRCh38/hg38)
Size:
17,788 bases
Orientation:
Minus strand
chr19:490,046-507,813
(GRCh37/hg19)

Genomic View for LOC105372232 Gene

Genes around LOC105372232 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372232 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372232 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372232 Gene

Proteins for LOC105372232 Gene

Post-translational modifications for LOC105372232 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372232 Gene

Domains & Families for LOC105372232 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372232 Gene

Function for LOC105372232 Gene

Phenotypes From GWAS Catalog for LOC105372232 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372232 Gene

Localization for LOC105372232 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372232 Gene

Pathways & Interactions for LOC105372232 Gene

SuperPathways for LOC105372232 Gene

No Data Available

Interacting Proteins for LOC105372232 Gene

Gene Ontology (GO) - Biological Process for LOC105372232 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372232 Gene

Drugs & Compounds for LOC105372232 Gene

No Compound Related Data Available

Transcripts for LOC105372232 Gene

mRNA/cDNA for LOC105372232 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372232 Gene

No ASD Table

Relevant External Links for LOC105372232 Gene

GeneLoc Exon Structure for
LOC105372232

Expression for LOC105372232 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372232 Gene

Orthologs for LOC105372232 Gene

Evolution for LOC105372232 Gene

ENSEMBL:
Gene Tree for LOC105372232 (if available)
TreeFam:
Gene Tree for LOC105372232 (if available)

No data available for Orthologs for LOC105372232 Gene

Paralogs for LOC105372232 Gene

No data available for Paralogs for LOC105372232 Gene

Variants for LOC105372232 Gene

Sequence variations from dbSNP and Humsavar for LOC105372232 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000104932 -- 499,991(-) G/C intron_variant
rs1000265907 -- 509,353(-) C/A upstream_transcript_variant
rs1000541929 -- 503,516(-) G/A intron_variant
rs1000573842 -- 506,260(-) A/C intron_variant
rs1000762902 -- 509,165(-) G/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372232 Gene

Disorders for LOC105372232 Gene

No disorders were found for LOC105372232 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372232 Gene

Publications for LOC105372232 Gene

No publications were found for LOC105372232 Gene.

Products for LOC105372232 Gene

Sources for LOC105372232 Gene

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