LOC105372228 Gene (RNA Gene)

Uncharacterized LOC105372228

GC18P079611
GIFtS:
1
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Aliases for LOC105372228 Gene

Subcategory (RNA class) for LOC105372228 Gene

ncRNA

Aliases for LOC105372228 Gene

  • Uncharacterized LOC105372228 3

External Ids for LOC105372228 Gene

Previous GeneCards Identifiers for LOC105372228 Gene

  • GC18U901094

Summaries for LOC105372228 Gene

GeneCards Summary for LOC105372228 Gene

LOC105372228 (Uncharacterized LOC105372228) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372228 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372228 Gene

Genomics for LOC105372228 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LOC105372228 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH18J079610 Enhancer 0.8 Ensembl ENCODE 600.7 +0.7 662 1.8 IKZF1 JUND RBAK ZBTB20 EGR1 ZNF10 ZSCAN29 FOS FOSL1 ZFHX2 ENSG00000267409 LOC105372228 RBFA HSALNG0122769 CTDP1 NFATC1
GH18J079600 Enhancer 1 Ensembl ENCODE 0.4 -9.3 -9310 0.9 LEF1 IKZF1 DDX20 MTA2 PKNOX1 ZNF24 MTA1 NR2C1 BRD9 DPF2 piR-51878-019 LOC105372228 CTDP1 NFATC1
GH18J079602 Enhancer 0.2 Ensembl 0.4 -8.1 -8066 0.4 piR-51878-019 LOC105372228 CTDP1 NFATC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372228 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105372228 Gene

Genomic Locations for LOC105372228 Gene
chr18:79,610,651-79,615,120
(GRCh38/hg38)
Size:
4,470 bases
Orientation:
Plus strand

Genomic View for LOC105372228 Gene

Genes around LOC105372228 on UCSC Golden Path with GeneCards custom track
LOC105372228 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105372228 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372228 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC105372228 Gene

Proteins for LOC105372228 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC105372228 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372228 Gene

Domains & Families for LOC105372228 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372228 Gene

Function for LOC105372228 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for LOC105372228 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372228 Gene

Localization for LOC105372228 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372228 Gene

Pathways & Interactions for LOC105372228 Gene

PathCards logo

SuperPathways for LOC105372228 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105372228 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372228 Gene

Drugs & Compounds for LOC105372228 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC105372228 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
LOC105372228 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372228 Gene

No ASD Table

Relevant External Links for LOC105372228 Gene

GeneLoc Exon Structure for
LOC105372228

No data available for mRNA/cDNA for LOC105372228 Gene

Expression for LOC105372228 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372228 Gene

Orthologs for LOC105372228 Gene

No data available for Orthologs and Evolution for LOC105372228 Gene

Paralogs for LOC105372228 Gene

No data available for Paralogs for LOC105372228 Gene

Variants for LOC105372228 Gene

Additional dbSNP identifiers (rs#s) for LOC105372228 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372228 Gene

Disorders for LOC105372228 Gene

No disorders were found for LOC105372228 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372228 Gene

Publications for LOC105372228 Gene

No publications were found for LOC105372228 Gene.

No data available for Mastermind for LOC105372228 Gene

Products for LOC105372228 Gene

Sources for LOC105372228 Gene