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Aliases for LOC105372226 Gene

Subcategory (RNA class) for LOC105372226 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372226 Gene

  • Uncharacterized LOC105372226 3

External Ids for LOC105372226 Gene

Previous GeneCards Identifiers for LOC105372226 Gene

  • GC18U900939

Summaries for LOC105372226 Gene

GeneCards Summary for LOC105372226 Gene

LOC105372226 (Uncharacterized LOC105372226) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372226 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372226 Gene

Genomics for LOC105372226 Gene

GeneHancer (GH) Regulatory Elements for LOC105372226 Gene

Promoters and enhancers for LOC105372226 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J079300 Enhancer 0.2 FANTOM5 650.7 +0.3 261 0.2 LOC105372226 ENSG00000267628 ATP9B
GH18J079283 Enhancer 0.8 VISTA UCNEbase 0.4 +17.1 17143 1 RCOR1 CHD2 LOC105372226 ENSG00000267628 ATP9B
GH18J079276 Enhancer 0.4 ENCODE 0.3 +24.7 24734 0.2 NFE2 RUNX3 ENSG00000267251 ENSG00000267628 LOC105372226 ATP9B
GH18J079326 Enhancer 0.3 ENCODE 0.3 -26.4 -26422 1.5 MNT ENSG00000267015 LOC105372226 ATP9B
GH18J079260 Enhancer 0.3 ENCODE 0.3 +40.1 40084 0.2 NR2F2 ENSG00000267628 LOC105372226 ATP9B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372226 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372226 Gene

Genomic Locations for LOC105372226 Gene
chr18:79,272,306-79,300,810
(GRCh38/hg38)
Size:
28,505 bases
Orientation:
Minus strand

Genomic View for LOC105372226 Gene

Genes around LOC105372226 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372226 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372226 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372226 Gene

Proteins for LOC105372226 Gene

Post-translational modifications for LOC105372226 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372226 Gene

Domains & Families for LOC105372226 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372226 Gene

Function for LOC105372226 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372226 Gene

Localization for LOC105372226 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372226 Gene

Pathways & Interactions for LOC105372226 Gene

SuperPathways for LOC105372226 Gene

No Data Available

Interacting Proteins for LOC105372226 Gene

Gene Ontology (GO) - Biological Process for LOC105372226 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372226 Gene

Drugs & Compounds for LOC105372226 Gene

No Compound Related Data Available

Transcripts for LOC105372226 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372226 Gene

No ASD Table

Relevant External Links for LOC105372226 Gene

GeneLoc Exon Structure for
LOC105372226

No data available for mRNA/cDNA for LOC105372226 Gene

Expression for LOC105372226 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372226 Gene

Orthologs for LOC105372226 Gene

No data available for Orthologs and Evolution for LOC105372226 Gene

Paralogs for LOC105372226 Gene

No data available for Paralogs for LOC105372226 Gene

Variants for LOC105372226 Gene

Sequence variations from dbSNP and Humsavar for LOC105372226 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000111739 -- 79,280,621(-) G/A genic_downstream_transcript_variant, intron_variant
rs1000167742 -- 79,296,265(-) C/T intron_variant
rs1000190531 -- 79,280,108(-) A/G genic_downstream_transcript_variant, intron_variant
rs1000237263 -- 79,289,960(-) C/T intron_variant
rs1000309010 -- 79,274,647(-) TATTATT/TATT genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372226 Gene

Disorders for LOC105372226 Gene

No disorders were found for LOC105372226 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372226 Gene

Publications for LOC105372226 Gene

No publications were found for LOC105372226 Gene.

Products for LOC105372226 Gene

Sources for LOC105372226 Gene

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