Aliases for LOC105372221 Gene
Subcategory (RNA class) for LOC105372221 Gene
ncRNA
Quality Score for this RNA gene is
13
Aliases for LOC105372221 Gene
- Uncharacterized LOC105372221 3
External Ids for LOC105372221 Gene
- Entrez Gene: 105372221
Previous GeneCards Identifiers for LOC105372221 Gene
- GC18U901016
Summaries for LOC105372221 Gene
GeneCards Summary for LOC105372221 Gene
LOC105372221 (Uncharacterized LOC105372221) is an RNA Gene, and is affiliated with the ncRNA class.
Additional gene information for LOC105372221 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372221 Gene
Genomics for LOC105372221 Gene
GeneHancer (GH) Regulatory Elements for LOC105372221 Gene
Promoters and enhancers for LOC105372221 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH18J078641 | Enhancer | 0.8 | FANTOM5 Ensembl ENCODE | 0.7 | +3.8 | 3770 | 2.4 | POLR2A | ATP9B LOC105372221 GC18P078795 | |
| GH18J078632 | Enhancer | 0.7 | FANTOM5 ENCODE | 0.4 | -7.0 | -6954 | 0.4 | PKNOX1 CREB1 FOSL2 FOS | ATP9B LOC105372221 GC18P078611 | |
| GH18J078720 | Enhancer | 1.2 | VISTA UCNEbase ENCODE | 0.2 | +82.8 | 82825 | 2.3 | NANOG POU5F1 | GC18P078795 LOC105372221 | |
| GH18J078701 | Enhancer | 1 | VISTA UCNEbase | 0.2 | +62.7 | 62706 | 1.4 | CBX8 POLR2A | LOC105372221 GC18P078795 | |
| GH18J078757 | Enhancer | 0.7 | VISTA UCNEbase | 0.1 | +119.0 | 118989 | 1.1 | ZEB1 | GC18P078795 LOC105372221 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around LOC105372221 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for LOC105372221 Gene
Genomic Locations for LOC105372221 Gene
- chr18:78,639,294-78,641,237
- (GRCh38/hg38)
- Size:
- 1,944 bases
- Orientation:
- Plus strand
Genomic View for LOC105372221 Gene
Genes around LOC105372221 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 18q23 by Entrez Gene
LOC105372221 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC105372221 Gene
Proteins for LOC105372221 Gene
Post-translational modifications for LOC105372221 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for LOC105372221
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105372221
- Origene Custom Protein Services for LOC105372221
- Search GeneTex for Proteins for LOC105372221
No data available for DME Specific Peptides for LOC105372221 Gene
Domains & Families for LOC105372221 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372221 Gene
Function for LOC105372221 Gene
Phenotypes From GWAS Catalog for LOC105372221 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for LOC105372221
-
miRNA Products
Inhibitory RNA Products
Clone Products
- GenScript: Custom all cDNA clones Services for LOC105372221
- VectorBuilder custom plasmid, inducible vectors for LOC105372221
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-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372221 Gene
Localization for LOC105372221 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372221 Gene
Transcripts for LOC105372221 Gene
miRNA Products
Inhibitory RNA Products
Clone Products
- GenScript: Custom all cDNA clones Services for LOC105372221
- VectorBuilder custom plasmid, inducible vectors for LOC105372221
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LOC105372221
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Relevant External Links for LOC105372221 Gene
- GeneLoc Exon Structure for
- LOC105372221
No data available for mRNA/cDNA for LOC105372221 Gene
Expression for LOC105372221 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372221 Gene
Orthologs for LOC105372221 Gene
No data available for Orthologs and Evolution for LOC105372221 Gene
Paralogs for LOC105372221 Gene
No data available for Paralogs for LOC105372221 Gene
Variants for LOC105372221 Gene
| SNP ID | Clin | Chr 18 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000501317 | -- | 78,640,081(+) | A/G | intron_variant | |
| rs1000546884 | -- | 78,639,906(+) | G/A | intron_variant | |
| rs1001901256 | -- | 78,640,752(+) | G/A | intron_variant | |
| rs1001953405 | -- | 78,640,480(+) | A/G | intron_variant | |
| rs1003626340 | -- | 78,641,602(+) | C/T | downstream_transcript_variant |
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372221 Gene
Disorders for LOC105372221 Gene
No disorders were found for LOC105372221 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372221 Gene
Publications for LOC105372221 Gene
No publications were found for LOC105372221 Gene.
Products for LOC105372221 Gene
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- Lentiviral ORF Clones
- Cyagen custom Knockout/knockin (KOKI) mouse models for LOC105372221
- VectorBuilder custom plasmid, inducible vectors for LOC105372221
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LOC105372221
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Browse GeneCopoeia Cell Lines
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Sources for LOC105372221 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
- (159) GlyConnect
- (160) Aminode
- (161) GeneCopoeia
- (162) GPS-Prot
- (163) RNACentral
- (164) LncRNADisease
- (165) LOVD
- (166) miR2Disease
- (167) DiseaseEnhancer
- (168) Boster Bio
- (169) Biorbyt