Aliases for LOC105372209 Gene

Data sources for LOC105372209 Gene:

Subcategory (RNA class) for LOC105372209 Gene

ncRNA

Aliases for LOC105372209 Gene

External Ids for LOC105372209 Gene

Previous GeneCards Identifiers for LOC105372209 Gene

  • GC18U901147

Summaries for LOC105372209 Gene

GeneCards Summary for LOC105372209 Gene

LOC105372209 (Uncharacterized LOC105372209) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372209 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372209 Gene

Genomics for LOC105372209 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105372209 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J076233 Enhancer 0.6 Ensembl ENCODE 250.7 +1.6 1622 1.5 CEBPB EP300 TCF7L2 ENSG00000266014 LOC105372209 ENSG00000263982 ENSG00000264595 LOC105372210 LOC105372204 ZNF516
GH18J076232 Enhancer 0.5 FANTOM5 250.7 -0.1 -55 0.2 CEBPB MAX EP300 STAT3 TCF7L2 ZKSCAN1 FOS ENSG00000266014 LOC105372209 piR-35907 ENSG00000264595 LOC105372210 LOC105372204 ZNF516
GH18J076234 Enhancer 0.3 Ensembl 250.7 +0.5 466 0.4 TCF7L2 ENSG00000266014 LOC105372209 ENSG00000264595 LOC105372210 LOC105372204 ZNF516
GH18J076231 Enhancer 0.2 Ensembl 250.7 -1.2 -1233 0.2 ENSG00000266014 LOC105372209 piR-35907 ENSG00000264595 LOC105372210 LOC105372204 ZNF516
GH18J076257 Enhancer 0.8 Ensembl ENCODE CraniofacialAtlas 0.3 +25.7 25689 4 CTCF RAD21 TEAD3 SMC3 ZNF143 TEAD1 ENSG00000264212 ENSG00000266614 ENSG00000263982 LOC105372209 LOC105372204 ZNF516
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372209 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105372209 Gene

Latest Assembly
chr18:76,232,934-76,260,119
(GRCh38/hg38)
Size:
27,186 bases
Orientation:
Plus strand

Genomic View for LOC105372209 Gene

Genes around LOC105372209 on UCSC Golden Path with GeneCards custom track
LOC105372209 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105372209 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372209 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372209 Gene

Proteins for LOC105372209 Gene

Post-translational modifications for LOC105372209 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372209 Gene

Domains & Families for LOC105372209 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372209 Gene

Function for LOC105372209 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372209 Gene

Localization for LOC105372209 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372209 Gene

Pathways & Interactions for LOC105372209 Gene

PathCards logo

SuperPathways for LOC105372209 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105372209 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372209 Gene

Drugs & Compounds for LOC105372209 Gene

No Compound Related Data Available

Transcripts for LOC105372209 Gene

LOC105372209 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372209 Gene

No ASD Table

Relevant External Links for LOC105372209 Gene

GeneLoc Exon Structure for
LOC105372209

No data available for mRNA/cDNA for LOC105372209 Gene

Expression for LOC105372209 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC105372209

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372209 Gene

Orthologs for LOC105372209 Gene

No data available for Orthologs and Evolution for LOC105372209 Gene

Paralogs for LOC105372209 Gene

No data available for Paralogs for LOC105372209 Gene

Variants for LOC105372209 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105372209 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372209 Gene

Disorders for LOC105372209 Gene

No disorders were found for LOC105372209 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372209 Gene

Publications for LOC105372209 Gene

No publications were found for LOC105372209 Gene.

No data available for Mastermind for LOC105372209 Gene

Products for LOC105372209 Gene

Sources for LOC105372209 Gene