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Aliases for LOC105372174 Gene

Subcategory (RNA class) for LOC105372174 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105372174 Gene

  • Uncharacterized LOC105372174 3
  • AC022662.1 5

External Ids for LOC105372174 Gene

Previous GeneCards Identifiers for LOC105372174 Gene

  • GC18U901127

Summaries for LOC105372174 Gene

GeneCards Summary for LOC105372174 Gene

LOC105372174 (Uncharacterized LOC105372174) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372174 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372174 Gene

Genomics for LOC105372174 Gene

GeneHancer (GH) Regulatory Elements for LOC105372174 Gene

Promoters and enhancers for LOC105372174 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I067627 Enhancer 0.7 ENCODE 0.8 -4.7 -4658 1.8 ELK4 STAT1 JUN MAX CEBPB EP300 RAD21 BRCA1 RFX5 YY1 LOC105372174 ENSG00000263594 LOC643542
GH18I067620 Enhancer 0.6 ENCODE 0.8 +2.2 2237 2.1 RXRA MAX REST RAD21 GABPA YY1 JUND ATF3 HNF4G HNF4A DSEL LOC105372174 GC18M067603 LOC643542
GH18I067599 Enhancer 0.7 ENCODE 0.3 +23.5 23462 2.4 FOXA2 TAF1 JUN RAD21 YY1 POLR2A RCOR1 FOS CHD2 CEBPB GC18M067603 LOC105372174 GC18P067575 LOC643542
GH18I067634 Enhancer 0.5 ENCODE 0.4 -10.8 -10825 1.3 MAFF NFIC NFIB POU5F1 MAFK ETS1 LOC105372174 ENSG00000263594 LOC643542
GH18I067668 Enhancer 0.8 Ensembl ENCODE 0.2 -46.7 -46748 3.6 JUN CEBPB REST EP300 RAD21 JUND MAFF STAT3 FOS PRDM1 ENSG00000263594 LOC105372174 LOC105372173 LOC643542
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372174 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372174 Gene

Genomic Locations for LOC105372174 Gene
chr18:67,587,245-67,623,863
(GRCh38/hg38)
Size:
36,619 bases
Orientation:
Minus strand
chr18:65,269,929-65,270,259
(GRCh37/hg19)

Genomic View for LOC105372174 Gene

Genes around LOC105372174 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372174 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372174 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372174 Gene

Proteins for LOC105372174 Gene

Post-translational modifications for LOC105372174 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372174 Gene

Domains & Families for LOC105372174 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372174 Gene

Function for LOC105372174 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372174 Gene

Localization for LOC105372174 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372174 Gene

Pathways & Interactions for LOC105372174 Gene

SuperPathways for LOC105372174 Gene

No Data Available

Interacting Proteins for LOC105372174 Gene

Gene Ontology (GO) - Biological Process for LOC105372174 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372174 Gene

Drugs & Compounds for LOC105372174 Gene

No Compound Related Data Available

Transcripts for LOC105372174 Gene

mRNA/cDNA for LOC105372174 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372174 Gene

No ASD Table

Relevant External Links for LOC105372174 Gene

GeneLoc Exon Structure for
LOC105372174

Expression for LOC105372174 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372174 Gene

Orthologs for LOC105372174 Gene

Evolution for LOC105372174 Gene

ENSEMBL:
Gene Tree for LOC105372174 (if available)
TreeFam:
Gene Tree for LOC105372174 (if available)

No data available for Orthologs for LOC105372174 Gene

Paralogs for LOC105372174 Gene

No data available for Paralogs for LOC105372174 Gene

Variants for LOC105372174 Gene

Sequence variations from dbSNP and Humsavar for LOC105372174 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000005222 -- 67,588,459(-) A/G intron_variant
rs1000015942 -- 67,599,250(-) A/T intron_variant
rs1000061217 -- 67,595,024(-) C/G intron_variant
rs1000088272 -- 67,587,134(-) A/G non_coding_transcript_variant
rs1000106492 -- 67,616,674(-) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372174 Gene

Disorders for LOC105372174 Gene

No disorders were found for LOC105372174 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372174 Gene

Publications for LOC105372174 Gene

No publications were found for LOC105372174 Gene.

Products for LOC105372174 Gene

Sources for LOC105372174 Gene

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