Aliases for LOC105372165 Gene

Data sources for LOC105372165 Gene:

Subcategory (RNA class) for LOC105372165 Gene

ncRNA

Aliases for LOC105372165 Gene

External Ids for LOC105372165 Gene

Previous GeneCards Identifiers for LOC105372165 Gene

  • GC18U900873

Summaries for LOC105372165 Gene

GeneCards Summary for LOC105372165 Gene

LOC105372165 (Uncharacterized LOC105372165) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372165 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372165 Gene

Genomics for LOC105372165 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105372165 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J063968 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 250.7 +1.9 1916 3.4 ZBTB10 CEBPA ETS1 POLR2A ZIC2 THAP11 CEBPB SIN3A ELK1 GABPA SERPINB8 ENSG00000283667 LOC105372165 SERPINB10 HMSD
GH18J063973 Enhancer 0.2 Ensembl 250.7 -0.6 -610 0.4 LOC105372165 SERPINB10 SERPINB8 HSALNG0122078 HMSD
GH18J063974 Promoter/Enhancer 1.1 Ensembl ENCODE dbSUPER 0.7 -3.0 -3010 1.2 CTCF RXRA RAD21 FOXA2 SMC3 JUND SPI1 HNF4A REST MAX SERPINB10 SERPINB8 HSALNG0122078 LOC105372165 HMSD
GH18J063978 Promoter/Enhancer 0.5 EPDnew dbSUPER 0.4 -5.8 -5835 0.1 HSALNG0122078 SERPINB8 SERPINB10 LOC105372165 HMSD
GH18J063965 Enhancer 0.4 Ensembl 0.4 +5.6 5590 2 RXRA HNF4A MAX NR2F2 SERPINB10 ENSG00000283667 HSALNG0122075 SERPINB8 LOC105372165 HMSD
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372165 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105372165 Gene

Latest Assembly
chr18:63,966,365-63,972,591
(GRCh38/hg38)
Size:
6,227 bases
Orientation:
Minus strand

Genomic View for LOC105372165 Gene

Genes around LOC105372165 on UCSC Golden Path with GeneCards custom track
LOC105372165 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105372165 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372165 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372165 Gene

Proteins for LOC105372165 Gene

Post-translational modifications for LOC105372165 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372165 Gene

Domains & Families for LOC105372165 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372165 Gene

Function for LOC105372165 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372165 Gene

Localization for LOC105372165 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372165 Gene

Pathways & Interactions for LOC105372165 Gene

PathCards logo

SuperPathways for LOC105372165 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105372165 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372165 Gene

Drugs & Compounds for LOC105372165 Gene

No Compound Related Data Available

Transcripts for LOC105372165 Gene

LOC105372165 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372165 Gene

No ASD Table

Relevant External Links for LOC105372165 Gene

GeneLoc Exon Structure for
LOC105372165

No data available for mRNA/cDNA for LOC105372165 Gene

Expression for LOC105372165 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372165 Gene

Orthologs for LOC105372165 Gene

No data available for Orthologs and Evolution for LOC105372165 Gene

Paralogs for LOC105372165 Gene

No data available for Paralogs for LOC105372165 Gene

Variants for LOC105372165 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105372165 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372165 Gene

Disorders for LOC105372165 Gene

No disorders were found for LOC105372165 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372165 Gene

Publications for LOC105372165 Gene

No publications were found for LOC105372165 Gene.

No data available for Mastermind for LOC105372165 Gene

Products for LOC105372165 Gene

Sources for LOC105372165 Gene