Aliases for LOC105372158 Gene

Data sources for LOC105372158 Gene:

Subcategory (RNA class) for LOC105372158 Gene

ncRNA

Aliases for LOC105372158 Gene

External Ids for LOC105372158 Gene

Previous GeneCards Identifiers for LOC105372158 Gene

  • GC18U900866
  • GC18M061897

Summaries for LOC105372158 Gene

GeneCards Summary for LOC105372158 Gene

LOC105372158 (Uncharacterized LOC105372158) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372158 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372158 Gene

Genomics for LOC105372158 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105372158 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J062017 Enhancer 0.8 Ensembl ENCODE CraniofacialAtlas 250.7 -0.1 -118 2.2 SPI1 REST RCOR1 SP1 POLR2A CHD2 NR2F2 LOC105372158 lnc-PIGN-1 RELCH PIGN piR-52079-089 HSALNG0121956 RNF152
GH18J062019 Enhancer 0.2 Ensembl 250.7 -1.7 -1719 0.2 LOC105372158 lnc-PIGN-1 PIGN piR-52079-089 RNF152
GH18J061997 Enhancer 0.6 Ensembl ENCODE 0.4 +19.4 19381 3.6 MAFK JUND POLR2A EP300 CEBPB PIGN RELCH HSALNG0121956 lnc-PIGN-1 LOC105372158 RNF152
GH18J062000 Enhancer 0.6 Ensembl ENCODE 0.4 +16.6 16588 1.2 NANOG USF1 KDM1A PIGN RELCH HSALNG0121956 lnc-PIGN-1 LOC105372158 RNF152
GH18J061988 Enhancer 0.6 Ensembl 0.3 +29.3 29269 1.8 FEZF1 KLF7 ZNF843 PRDM6 HNF4A SCRT1 GLIS1 PRDM4 TRIM28 ZXDB RELCH PIGN HSALNG0121956 lnc-PIGN-1 LOC105372158 lnc-RNF152-4 RPIAP1 RNF152
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372158 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105372158 Gene

Latest Assembly
chr18:61,980,030-62,018,182
(GRCh38/hg38)
Size:
38,153 bases
Orientation:
Minus strand

Genomic View for LOC105372158 Gene

Genes around LOC105372158 on UCSC Golden Path with GeneCards custom track
LOC105372158 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105372158 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372158 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372158 Gene

Proteins for LOC105372158 Gene

Post-translational modifications for LOC105372158 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372158 Gene

Domains & Families for LOC105372158 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372158 Gene

Function for LOC105372158 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372158 Gene

Localization for LOC105372158 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372158 Gene

Pathways & Interactions for LOC105372158 Gene

PathCards logo

SuperPathways for LOC105372158 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105372158 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372158 Gene

Drugs & Compounds for LOC105372158 Gene

No Compound Related Data Available

Transcripts for LOC105372158 Gene

LOC105372158 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372158 Gene

No ASD Table

Relevant External Links for LOC105372158 Gene

GeneLoc Exon Structure for
LOC105372158

No data available for mRNA/cDNA for LOC105372158 Gene

Expression for LOC105372158 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372158 Gene

Orthologs for LOC105372158 Gene

No data available for Orthologs and Evolution for LOC105372158 Gene

Paralogs for LOC105372158 Gene

No data available for Paralogs for LOC105372158 Gene

Variants for LOC105372158 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105372158 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372158 Gene

Disorders for LOC105372158 Gene

No disorders were found for LOC105372158 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372158 Gene

Publications for LOC105372158 Gene

No publications were found for LOC105372158 Gene.

No data available for Mastermind for LOC105372158 Gene

Products for LOC105372158 Gene

Sources for LOC105372158 Gene