Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105372158 Gene

Subcategory (RNA class) for LOC105372158 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105372158 Gene

  • Uncharacterized LOC105372158 3

External Ids for LOC105372158 Gene

Previous GeneCards Identifiers for LOC105372158 Gene

  • GC18U900866

Summaries for LOC105372158 Gene

GeneCards Summary for LOC105372158 Gene

LOC105372158 (Uncharacterized LOC105372158) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372158 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372158 Gene

Genomics for LOC105372158 Gene

GeneHancer (GH) Regulatory Elements for LOC105372158 Gene

Promoters and enhancers for LOC105372158 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I062017 Enhancer 0.7 Ensembl ENCODE 550.8 -0.2 -238 1.8 POLR2A RCOR1 REST NR2F2 CHD2 LOC105372158 KIAA1468 PIGN GC18P062067
GH18I061997 Enhancer 0.7 Ensembl ENCODE 0.4 +19.2 19158 2.6 JUND GATA3 POLR2A JUN PIGN KIAA1468 GC18M061984 LOC105372158
GH18I061947 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +67.2 67171 6.1 PKNOX1 SMAD1 BMI1 BATF IRF4 ATF7 ETV6 FOS BCLAF1 IKZF2 PIGN KIAA1468 RPIAP1 LOC105372159 LOC105372158
GH18I061990 Enhancer 0.8 Ensembl ENCODE 0.3 +25.5 25467 3.3 RXRA JUN RAD21 JUND ATF3 HNF4G HNF4A FOS PRDM1 PIGN KIAA1468 GC18M061984 LOC105372158
GH18I062000 Enhancer 0.4 ENCODE 0.4 +16.6 16551 1.2 USF1 POU5F1 PIGN KIAA1468 GC18M061984 LOC105372158
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372158 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372158 Gene

Genomic Locations for LOC105372158 Gene
chr18:61,897,669-62,018,119
(GRCh38/hg38)
Size:
120,451 bases
Orientation:
Minus strand

Genomic View for LOC105372158 Gene

Genes around LOC105372158 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372158 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372158 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372158 Gene

Proteins for LOC105372158 Gene

Post-translational modifications for LOC105372158 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372158 Gene

Domains & Families for LOC105372158 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372158 Gene

Function for LOC105372158 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372158 Gene

Localization for LOC105372158 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372158 Gene

Pathways & Interactions for LOC105372158 Gene

SuperPathways for LOC105372158 Gene

No Data Available

Interacting Proteins for LOC105372158 Gene

Gene Ontology (GO) - Biological Process for LOC105372158 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372158 Gene

Drugs & Compounds for LOC105372158 Gene

No Compound Related Data Available

Transcripts for LOC105372158 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372158 Gene

No ASD Table

Relevant External Links for LOC105372158 Gene

GeneLoc Exon Structure for
LOC105372158

No data available for mRNA/cDNA for LOC105372158 Gene

Expression for LOC105372158 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372158 Gene

Orthologs for LOC105372158 Gene

No data available for Orthologs and Evolution for LOC105372158 Gene

Paralogs for LOC105372158 Gene

No data available for Paralogs for LOC105372158 Gene

Variants for LOC105372158 Gene

Sequence variations from dbSNP and Humsavar for LOC105372158 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000003207 -- 61,898,556(-) G/A intron_variant
rs1000014102 -- 61,957,935(-) C/T intron_variant
rs1000029712 -- 61,918,109(-) T/C intron_variant
rs1000041313 -- 61,900,536(-) G/A/C intron_variant
rs1000051495 -- 62,005,965(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372158 Gene

Disorders for LOC105372158 Gene

No disorders were found for LOC105372158 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372158 Gene

Publications for LOC105372158 Gene

No publications were found for LOC105372158 Gene.

Products for LOC105372158 Gene

Sources for LOC105372158 Gene

Content
Loading form....