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Aliases for LOC105372155 Gene

Subcategory (RNA class) for LOC105372155 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372155 Gene

  • Uncharacterized LOC105372155 3
  • AC090621.1 5

External Ids for LOC105372155 Gene

Previous GeneCards Identifiers for LOC105372155 Gene

  • GC18U901028

Summaries for LOC105372155 Gene

GeneCards Summary for LOC105372155 Gene

LOC105372155 (Uncharacterized LOC105372155) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372155 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372155 Gene

Genomics for LOC105372155 Gene

GeneHancer (GH) Regulatory Elements for LOC105372155 Gene

Promoters and enhancers for LOC105372155 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J060295 Enhancer 0.3 ENCODE 656.8 +1.7 1742 0.9 MAFK LOC105372155 MC4R
GH18J059897 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 14.6 -393.7 -393679 6.5 HDGF FOXA2 SMAD1 SIN3A FEZF1 IRF4 POLR2B E2F8 FOS KLF13 PMAIP1 ENSG00000267462 SDCCAG3P1 ENSG00000267269 ENSG00000267686 LOC342784 ENSG00000267061 LOC105372155 ENSG00000267215 CPLX4
GH18J059880 Enhancer 1.4 Ensembl ENCODE dbSUPER 14.6 -411.9 -411924 2.5 FOXA2 ZNF493 ZFP64 YY1 TCF12 ZNF121 ZNF213 RUNX3 ZNF202 ZC3H11A ENSG00000267462 SDCCAG3P1 ENSG00000267269 ENSG00000267686 ENSG00000267061 LOC342784 LOC105372155 ENSG00000267215 CPLX4 GC18M059879
GH18J059455 Promoter 1.2 EPDnew 14.6 -838.9 -838909 0.1 PKNOX1 ARNT FEZF1 ZNF121 GLIS2 ZNF213 KLF7 TSHZ1 ZNF488 ZNF623 CCBE1 ENSG00000267061 ENSG00000267269 ENSG00000267215 ENSG00000267462 SDCCAG3P1 ENSG00000267686 LOC105372145 LOC105372155 LOC342784
GH18J059484 Enhancer 0.9 ENCODE 14.6 -809.0 -809048 0.4 PKNOX1 ARNT FEZF1 ZNF2 ZNF213 KLF7 SP3 YY2 TSHZ1 ZNF488 ENSG00000267061 ENSG00000267269 ENSG00000267215 ENSG00000267686 ENSG00000267462 SDCCAG3P1 LOC342784 LOC105372155 LOC105372145 ZNF532
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372155 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372155 Gene

Genomic Locations for LOC105372155 Gene
chr18:60,294,151-60,301,145
(GRCh38/hg38)
Size:
6,995 bases
Orientation:
Plus strand
chr18:57,961,384-57,968,351
(GRCh37/hg19)
Size:
6,968 bases
Orientation:
Plus strand

Genomic View for LOC105372155 Gene

Genes around LOC105372155 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372155 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372155 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372155 Gene

Proteins for LOC105372155 Gene

Post-translational modifications for LOC105372155 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372155 Gene

Domains & Families for LOC105372155 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372155 Gene

Function for LOC105372155 Gene

Phenotypes From GWAS Catalog for LOC105372155 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372155 Gene

Localization for LOC105372155 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372155 Gene

Pathways & Interactions for LOC105372155 Gene

SuperPathways for LOC105372155 Gene

No Data Available

Interacting Proteins for LOC105372155 Gene

Gene Ontology (GO) - Biological Process for LOC105372155 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372155 Gene

Drugs & Compounds for LOC105372155 Gene

No Compound Related Data Available

Transcripts for LOC105372155 Gene

mRNA/cDNA for LOC105372155 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372155 Gene

No ASD Table

Relevant External Links for LOC105372155 Gene

GeneLoc Exon Structure for
LOC105372155

Expression for LOC105372155 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372155 Gene

Orthologs for LOC105372155 Gene

Evolution for LOC105372155 Gene

ENSEMBL:
Gene Tree for LOC105372155 (if available)
TreeFam:
Gene Tree for LOC105372155 (if available)

No data available for Orthologs for LOC105372155 Gene

Paralogs for LOC105372155 Gene

No data available for Paralogs for LOC105372155 Gene

Variants for LOC105372155 Gene

Sequence variations from dbSNP and Humsavar for LOC105372155 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000141397 -- 60,292,667(+) CACA/CA upstream_transcript_variant
rs1000704909 -- 60,298,477(+) A/C intron_variant
rs1000933946 -- 60,298,062(+) G/A intron_variant
rs1001261510 -- 60,297,817(+) C/G intron_variant
rs1001271071 -- 60,299,418(+) T/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372155 Gene

Disorders for LOC105372155 Gene

No disorders were found for LOC105372155 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372155 Gene

Publications for LOC105372155 Gene

No publications were found for LOC105372155 Gene.

Products for LOC105372155 Gene

Sources for LOC105372155 Gene

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