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Aliases for LOC105372151 Gene

Subcategory (RNA class) for LOC105372151 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372151 Gene

  • Uncharacterized LOC105372151 3

External Ids for LOC105372151 Gene

Previous GeneCards Identifiers for LOC105372151 Gene

  • GC18U901044

Summaries for LOC105372151 Gene

GeneCards Summary for LOC105372151 Gene

LOC105372151 (Uncharacterized LOC105372151) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372151 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372151 Gene

Genomics for LOC105372151 Gene

GeneHancer (GH) Regulatory Elements for LOC105372151 Gene

Promoters and enhancers for LOC105372151 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J059926 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 650.7 0.0 -15 1.5 HDAC1 PKNOX1 STAT5A BATF IRF4 TCF12 ATF7 ETV6 BCLAF1 IKZF2 LOC105372151 LOC100128022 PMAIP1
GH18J059923 Enhancer 1 ENCODE dbSUPER 0.7 -3.8 -3769 1.2 HDGF PKNOX1 SMAD1 BATF IRF4 TCF12 ATF7 BCLAF1 IKZF2 RUNX3 LOC105372151 PMAIP1
GH18J059897 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.3 -26.9 -26899 6.5 HDGF FOXA2 SMAD1 SIN3A FEZF1 IRF4 POLR2B E2F8 FOS KLF13 PMAIP1 ENSG00000267462 SDCCAG3P1 ENSG00000267269 ENSG00000267686 LOC342784 ENSG00000267061 LOC105372155 ENSG00000267215 CPLX4
GH18J059916 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -9.2 -9240 3.8 PKNOX1 FEZF1 IRF4 GTF3C2 TCF12 ZNF766 GLIS2 GATA2 FOS ATF7 PMAIP1 LOC105372151
GH18J059906 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -17.8 -17781 5.6 HDAC1 PKNOX1 BMI1 ZBTB40 ZNF335 ZNF121 ZNF766 ZNF366 ZNF350 FOS PMAIP1 LOC105372151
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372151 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372151 Gene

Genomic Locations for LOC105372151 Gene
chr18:59,927,371-59,951,306
(GRCh38/hg38)
Size:
23,936 bases
Orientation:
Plus strand

Genomic View for LOC105372151 Gene

Genes around LOC105372151 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372151 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372151 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372151 Gene

Proteins for LOC105372151 Gene

Post-translational modifications for LOC105372151 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372151 Gene

Domains & Families for LOC105372151 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372151 Gene

Function for LOC105372151 Gene

Phenotypes From GWAS Catalog for LOC105372151 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372151 Gene

Localization for LOC105372151 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372151 Gene

Pathways & Interactions for LOC105372151 Gene

SuperPathways for LOC105372151 Gene

No Data Available

Interacting Proteins for LOC105372151 Gene

Gene Ontology (GO) - Biological Process for LOC105372151 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372151 Gene

Drugs & Compounds for LOC105372151 Gene

No Compound Related Data Available

Transcripts for LOC105372151 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372151 Gene

No ASD Table

Relevant External Links for LOC105372151 Gene

GeneLoc Exon Structure for
LOC105372151

No data available for mRNA/cDNA for LOC105372151 Gene

Expression for LOC105372151 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372151 Gene

Orthologs for LOC105372151 Gene

No data available for Orthologs and Evolution for LOC105372151 Gene

Paralogs for LOC105372151 Gene

No data available for Paralogs for LOC105372151 Gene

Variants for LOC105372151 Gene

Sequence variations from dbSNP and Humsavar for LOC105372151 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000185077 -- 59,934,590(+) G/A intron_variant
rs1000297088 -- 59,932,688(+) T/C intron_variant
rs1000346140 -- 59,940,833(+) C/A genic_downstream_transcript_variant, intron_variant
rs1000583910 -- 59,932,932(+) C/T intron_variant
rs1000605680 -- 59,949,457(+) G/A/T genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372151 Gene

Disorders for LOC105372151 Gene

No disorders were found for LOC105372151 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372151 Gene

Publications for LOC105372151 Gene

No publications were found for LOC105372151 Gene.

Products for LOC105372151 Gene

Sources for LOC105372151 Gene

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