Aliases for LOC105372145 Gene

Subcategory (RNA class) for LOC105372145 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372145 Gene

  • Uncharacterized LOC105372145 3

External Ids for LOC105372145 Gene

Previous GeneCards Identifiers for LOC105372145 Gene

  • GC18U901072

Summaries for LOC105372145 Gene

GeneCards Summary for LOC105372145 Gene

LOC105372145 (Uncharacterized LOC105372145) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372145 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372145 Gene

Genomics for LOC105372145 Gene

GeneHancer (GH) Regulatory Elements for LOC105372145 Gene

Promoters and enhancers for LOC105372145 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J058555 Enhancer 1 Ensembl ENCODE dbSUPER 750.6 -0.3 -282 2.3 ETV6 MLLT1 ZNF687 CREM RELA IKZF1 IKZF2 LARP7 POLR2A PKNOX1 ENSG00000267579 LOC105372145 ENSG00000267257 piR-52294-062 lnc-RAX-6 ALPK2
GH18J058563 Enhancer 1.6 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +9.8 9801 9.2 ZNF24 SP1 USF2 MIXL1 JUND ETV6 RELA HLF RAD21 ZNF652 MALT1 SNORA108 ALPK2 ENSG00000267579 LOC105372145 lnc-RAX-6
GH18J058558 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.6 +2.5 2533 1.8 LCORL ETV6 RELA NFIB RUNX3 NFIC BATF EBF1 ZNF217 ENSG00000267257 ENSG00000267579 LOC105372145 lnc-RAX-6 ALPK2
GH18J058561 Enhancer 0.3 dbSUPER 0.6 +4.6 4581 1.2 ZNF24 ZNF592 ENSG00000267579 LOC105372145 lnc-RAX-6 ALPK2
GH18J058553 Enhancer 0.3 dbSUPER 0.6 -2.6 -2612 0.9 NFIB PKNOX1 piR-52294-062 ENSG00000267257 LOC105372145 lnc-RAX-6 ALPK2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372145 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372145 Gene

Genomic Locations for LOC105372145 Gene
chr18:58,557,022-58,566,678
(GRCh38/hg38)
Size:
9,657 bases
Orientation:
Plus strand

Genomic View for LOC105372145 Gene

Genes around LOC105372145 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372145 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372145 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372145 Gene

Proteins for LOC105372145 Gene

Post-translational modifications for LOC105372145 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372145 Gene

Domains & Families for LOC105372145 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372145 Gene

Function for LOC105372145 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372145 Gene

Localization for LOC105372145 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372145 Gene

Pathways & Interactions for LOC105372145 Gene

PathCards logo

SuperPathways for LOC105372145 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105372145 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372145 Gene

Drugs & Compounds for LOC105372145 Gene

No Compound Related Data Available

Transcripts for LOC105372145 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372145 Gene

No ASD Table

Relevant External Links for LOC105372145 Gene

GeneLoc Exon Structure for
LOC105372145

No data available for mRNA/cDNA for LOC105372145 Gene

Expression for LOC105372145 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372145 Gene

Orthologs for LOC105372145 Gene

No data available for Orthologs and Evolution for LOC105372145 Gene

Paralogs for LOC105372145 Gene

No data available for Paralogs for LOC105372145 Gene

Variants for LOC105372145 Gene

Sequence variations from dbSNP and Humsavar for LOC105372145 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000113074 -- 58,562,826(+) G/A intron_variant
rs1000448306 -- 58,567,168(+) C/T downstream_transcript_variant
rs1000799709 -- 58,561,337(+) A/C intron_variant
rs1001084884 -- 58,560,888(+) C/A intron_variant
rs1001119658 -- 58,561,272(+) G/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372145 Gene

Disorders for LOC105372145 Gene

No disorders were found for LOC105372145 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372145 Gene

Publications for LOC105372145 Gene

No publications were found for LOC105372145 Gene.

No data available for External Links for LOC105372145 Gene

Products for LOC105372145 Gene

Sources for LOC105372145 Gene