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LOC105372136 Gene(RNA Gene)

Uncharacterized LOC105372136

GCID:
GC18P057050
GIFtS:
4
Genes Participants
UDN Logo

Aliases for LOC105372136 Gene

Subcategory (RNA class) for LOC105372136 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372136 Gene

  • Uncharacterized LOC105372136 3

External Ids for LOC105372136 Gene

Previous GeneCards Identifiers for LOC105372136 Gene

  • GC18U901122

Summaries for LOC105372136 Gene

GeneCards Summary for LOC105372136 Gene

LOC105372136 (Uncharacterized LOC105372136) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372136 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372136 Gene

Genomics for LOC105372136 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for LOC105372136 Gene

Promoters and enhancers for LOC105372136 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH18J057050 Enhancer 0.9 ENCODE 650.7 +1.1 1109 2 HDAC1 PKNOX1 SMAD1 YBX1 RAD21 CHAMP1 TCF12 GATA2 ATF7 IKZF2 LOC105372136 ST8SIA3 WDR7 LINC-ROR
GH18J057030 Enhancer 0.7 UCNEbase 0.4 -19.3 -19339 0.2 RXRA HNF4A NR2F6 RAD21 NR2F2 NR2C2 WDR7-OT1 LOC105372136 WDR7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372136 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372136 Gene

Genomic Locations for LOC105372136 Gene
chr18:57,050,096-57,051,426
(GRCh38/hg38)
Size:
1,331 bases
Orientation:
Plus strand

Genomic View for LOC105372136 Gene

Genes around LOC105372136 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372136 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372136 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC105372136 Gene

Proteins for LOC105372136 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC105372136 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372136 Gene

Domains & Families for LOC105372136 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372136 Gene

Function for LOC105372136 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372136 Gene

Localization for LOC105372136 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372136 Gene

Pathways & Interactions for LOC105372136 Gene

SuperPathways for LOC105372136 Gene

PathCards logo More details on SuperPathways for LOC105372136
No Data Available

Interacting Proteins for LOC105372136 Gene

Gene Ontology (GO) - Biological Process for LOC105372136 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372136 Gene

Drugs & Compounds for LOC105372136 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC105372136 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372136 Gene

No ASD Table

Relevant External Links for LOC105372136 Gene

GeneLoc Exon Structure for
LOC105372136

No data available for mRNA/cDNA for LOC105372136 Gene

Expression for LOC105372136 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372136 Gene

Orthologs for LOC105372136 Gene

No data available for Orthologs and Evolution for LOC105372136 Gene

Paralogs for LOC105372136 Gene

No data available for Paralogs for LOC105372136 Gene

Variants for LOC105372136 Gene

Sequence variations from dbSNP and Humsavar for LOC105372136 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000089170 -- 57,051,224(+) T/C intron_variant
rs1000523319 -- 57,050,991(+) C/A non_coding_transcript_variant
rs1001794510 -- 57,049,635(+) A/G upstream_transcript_variant
rs1002163317 -- 57,049,911(+) C/T upstream_transcript_variant
rs1002349164 -- 57,048,682(+) A/G/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372136 Gene

Disorders for LOC105372136 Gene

No disorders were found for LOC105372136 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372136 Gene

Publications for LOC105372136 Gene

No publications were found for LOC105372136 Gene.

Products for LOC105372136 Gene

Sources for LOC105372136 Gene

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