Aliases for LOC105372135 Gene
Subcategory (RNA class) for LOC105372135 Gene
ncRNA
Quality Score for this RNA gene is
1
Aliases for LOC105372135 Gene
- Uncharacterized LOC105372135 3
External Ids for LOC105372135 Gene
- Entrez Gene: 105372135
Previous GeneCards Identifiers for LOC105372135 Gene
- GC18U901041
Summaries for LOC105372135 Gene
GeneCards Summary for LOC105372135 Gene
LOC105372135 (Uncharacterized LOC105372135) is an RNA Gene, and is affiliated with the ncRNA class.
Additional gene information for LOC105372135 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372135 Gene
Genomics for LOC105372135 Gene
GeneHancer (GH) Regulatory Elements for LOC105372135 Gene
Promoters and enhancers for LOC105372135 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH18I056574 | Enhancer | 0.9 | Ensembl ENCODE | 0.8 | +2.3 | 2287 | 2.8 | CTCF FOXA2 RB1 MAX RAD21 YY1 ZNF143 SMC3 ZNF654 RXRA | LOC105372135 WDR7 | |
| GH18I056636 | Promoter/Enhancer | 2 | EPDnew Ensembl ENCODE | 0.2 | +64.5 | 64543 | 3.7 | HDGF MLX ARID4B SIN3A DMAP1 YY1 POLR2B ZNF207 ZNF143 FOS | TXNL1 WDR7 LOC105372135 | |
| GH18I056564 | Enhancer | 0.9 | Ensembl ENCODE | 0.4 | -7.9 | -7899 | 1.9 | FOXA2 MAX CEBPG RAD21 YY1 MIXL1 GATAD2A SOX5 TEAD1 FOXA3 | LOC105372135 GC18P056530 | |
| GH18I056563 | Enhancer | 0.6 | ENCODE | 0.4 | -9.8 | -9767 | 1.2 | CTCF L3MBTL2 MAX ZIC2 ZNF644 RAD21 POLR2A NR2C1 HMBOX1 ZNF143 | LOC105372135 GC18P056530 | |
| GH18I056569 | Enhancer | 0.2 | FANTOM5 | 0.8 | -4.3 | -4296 | 0.2 | LOC105372135 GC18P056530 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around LOC105372135 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for LOC105372135 Gene
Genomic Locations for LOC105372135 Gene
- chr18:56,573,518-56,575,165
- (GRCh38/hg38)
- Size:
- 1,648 bases
- Orientation:
- Plus strand
Genomic View for LOC105372135 Gene
Genes around LOC105372135 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 18q21.31 by Entrez Gene
LOC105372135 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC105372135 Gene
Proteins for LOC105372135 Gene
Post-translational modifications for LOC105372135 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for LOC105372135
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105372135
- Origene Custom Protein Services for LOC105372135
- Search GeneTex for Proteins for LOC105372135
No data available for DME Specific Peptides for LOC105372135 Gene
Domains & Families for LOC105372135 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372135 Gene
Function for LOC105372135 Gene
Phenotypes From GWAS Catalog for LOC105372135 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for LOC105372135
-
- Search ViGene Biosciences for LOC105372135
CRISPR Products
- Browse CRISPR knockouts for LOC105372135
miRNA Products
- Search ViGene Biosciences for LOC105372135
Inhibitory RNA Products
- Search ViGene Biosciences for LOC105372135
Clone Products
- GenScript: Custom all cDNA clones Services for LOC105372135
- VectorBuilder custom plasmid, inducible vectors for LOC105372135
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LOC105372135
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372135 Gene
Localization for LOC105372135 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372135 Gene
Transcripts for LOC105372135 Gene
CRISPR Products
- Browse CRISPR knockouts for LOC105372135
miRNA Products
- Search ViGene Biosciences for LOC105372135
Inhibitory RNA Products
- Search ViGene Biosciences for LOC105372135
Clone Products
- GenScript: Custom all cDNA clones Services for LOC105372135
- VectorBuilder custom plasmid, inducible vectors for LOC105372135
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LOC105372135
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Relevant External Links for LOC105372135 Gene
- GeneLoc Exon Structure for
- LOC105372135
No data available for mRNA/cDNA for LOC105372135 Gene
Expression for LOC105372135 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372135 Gene
Orthologs for LOC105372135 Gene
No data available for Orthologs and Evolution for LOC105372135 Gene
Paralogs for LOC105372135 Gene
No data available for Paralogs for LOC105372135 Gene
Variants for LOC105372135 Gene
| SNP ID | Clin | Chr 18 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000097269 | -- | 56,574,179(+) | G/T | intron_variant | |
| rs1004403812 | -- | 56,573,958(+) | C/T | intron_variant | |
| rs1004456177 | -- | 56,574,252(+) | TGTG/TG | intron_variant | |
| rs1004742976 | -- | 56,575,228(+) | A/G | downstream_transcript_variant | |
| rs1004795320 | -- | 56,575,582(+) | A/G | downstream_transcript_variant |
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372135 Gene
Disorders for LOC105372135 Gene
No disorders were found for LOC105372135 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372135 Gene
Publications for LOC105372135 Gene
No publications were found for LOC105372135 Gene.
Products for LOC105372135 Gene
- Browse R&D Systems for Antibodies
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- Design optimal peptide antigens
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- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
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- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for LOC105372135
- VectorBuilder custom plasmid, inducible vectors for LOC105372135
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LOC105372135
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for LOC105372135
- Search GeneTex for Proteins for LOC105372135
- Search ViGene Biosciences for LOC105372135
Sources for LOC105372135 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
