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Aliases for LOC105372130 Gene

Subcategory (RNA class) for LOC105372130 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105372130 Gene

  • Uncharacterized LOC105372130 3

External Ids for LOC105372130 Gene

Previous GeneCards Identifiers for LOC105372130 Gene

  • GC18U900865

Summaries for LOC105372130 Gene

GeneCards Summary for LOC105372130 Gene

LOC105372130 (Uncharacterized LOC105372130) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372130 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372130 Gene

Genomics for LOC105372130 Gene

GeneHancer (GH) Regulatory Elements for LOC105372130 Gene

Promoters and enhancers for LOC105372130 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I055665 Enhancer 0.3 FANTOM5 550.8 +0.2 234 0.3 LOC105372130 TCF4 RPL21P126 ENSG00000267284
GH18I055731 Enhancer 1.1 Ensembl ENCODE 0.2 +66.9 66862 1.2 ATF1 ARNT NCOA2 TCF12 GATA2 ATF7 RUNX3 JUNB NCOA1 REST TCF4 RPL21P126 ENSG00000267284 LINC01415 LOC105372130
GH18I055747 Enhancer 1 ENCODE 0.2 +83.1 83063 1.4 PKNOX1 SMAD1 ATF1 ARNT NCOA2 TCF12 ZNF766 GATA2 ATF7 ZNF263 LINC01415 ENSG00000267284 LOC105372130
GH18I055763 Enhancer 0.8 UCNEbase ENCODE 0.2 +98.5 98453 1.3 POLR2A ZIC2 LINC01415 ENSG00000267284 LOC105372130
GH18I055735 Enhancer 0.7 ENCODE 0.2 +69.8 69821 0.2 HDAC1 MEIS2 LEF1 PKNOX1 TEAD4 TAL1 TCF12 CTBP1 FOXK2 NCOR1 TCF4 RPL21P126 ENSG00000267284 LINC01415 LOC105372130
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372130 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372130 Gene

Genomic Locations for LOC105372130 Gene
chr18:55,665,544-55,839,862
(GRCh38/hg38)
Size:
174,319 bases
Orientation:
Plus strand

Genomic View for LOC105372130 Gene

Genes around LOC105372130 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372130 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372130 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372130 Gene

Proteins for LOC105372130 Gene

Post-translational modifications for LOC105372130 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372130 Gene

Domains & Families for LOC105372130 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372130 Gene

Function for LOC105372130 Gene

Phenotypes From GWAS Catalog for LOC105372130 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372130 Gene

Localization for LOC105372130 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372130 Gene

Pathways & Interactions for LOC105372130 Gene

SuperPathways for LOC105372130 Gene

No Data Available

Interacting Proteins for LOC105372130 Gene

Gene Ontology (GO) - Biological Process for LOC105372130 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372130 Gene

Drugs & Compounds for LOC105372130 Gene

No Compound Related Data Available

Transcripts for LOC105372130 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372130 Gene

No ASD Table

Relevant External Links for LOC105372130 Gene

GeneLoc Exon Structure for
LOC105372130

No data available for mRNA/cDNA for LOC105372130 Gene

Expression for LOC105372130 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372130 Gene

Orthologs for LOC105372130 Gene

No data available for Orthologs and Evolution for LOC105372130 Gene

Paralogs for LOC105372130 Gene

No data available for Paralogs for LOC105372130 Gene

Variants for LOC105372130 Gene

Sequence variations from dbSNP and Humsavar for LOC105372130 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000019696 -- 55,759,140(+) G/A genic_upstream_transcript_variant, intron_variant
rs1000024686 -- 55,728,680(+) T/C genic_upstream_transcript_variant, intron_variant
rs1000043876 -- 55,817,772(+) A/T genic_downstream_transcript_variant, intron_variant
rs1000080114 -- 55,665,962(+) G/A genic_upstream_transcript_variant, intron_variant
rs1000097729 -- 55,668,790(+) G/T genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372130 Gene

Disorders for LOC105372130 Gene

No disorders were found for LOC105372130 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372130 Gene

Publications for LOC105372130 Gene

No publications were found for LOC105372130 Gene.

Products for LOC105372130 Gene

Sources for LOC105372130 Gene

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