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Aliases for LOC105372125 Gene

Subcategory (RNA class) for LOC105372125 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105372125 Gene

  • Uncharacterized LOC105372125 3

External Ids for LOC105372125 Gene

Previous GeneCards Identifiers for LOC105372125 Gene

  • GC18U901126

Summaries for LOC105372125 Gene

GeneCards Summary for LOC105372125 Gene

LOC105372125 (Uncharacterized LOC105372125) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372125 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372125 Gene

Genomics for LOC105372125 Gene

GeneHancer (GH) Regulatory Elements for LOC105372125 Gene

Promoters and enhancers for LOC105372125 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I055069 Enhancer 1 FANTOM5 ENCODE 0.4 +15.7 15726 1.1 HDGF PKNOX1 SMAD1 RB1 BMI1 BATF KLF5 IRF4 ATF7 BCLAF1 GC18P055062 LOC105372125
GH18I055096 Enhancer 1 Ensembl ENCODE 0.4 -12.2 -12226 2.4 PKNOX1 ZSCAN4 KLF17 RAD21 RFX5 ZNF366 SCRT2 EGR2 ZNF654 USF2 LINC01929 LOC105372125
GH18I055101 Enhancer 0.6 ENCODE 0.4 -16.0 -16006 0.5 ZNF362 JUN CEBPB EP300 RFX5 SP1 JUND STAT3 FOSL2 RCOR1 LOC105372125 LINC01929
GH18I055100 Enhancer 0.6 ENCODE 0.4 -15.7 -15662 0.2 ZNF362 JUN CEBPB EP300 RFX5 SP1 JUND STAT3 FOSL2 RCOR1 LOC105372125 LINC01929
GH18I055119 Enhancer 0.8 ENCODE 0.3 -34.2 -34172 0.1 HDAC1 ARNT CHAMP1 TCF12 EGR1 NCOA1 NR2F2 ZNF148 MEF2D NFIC LINC01929 LOC105372125
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372125 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372125 Gene

Genomic Locations for LOC105372125 Gene
chr18:55,079,050-55,085,363
(GRCh38/hg38)
Size:
6,314 bases
Orientation:
Minus strand

Genomic View for LOC105372125 Gene

Genes around LOC105372125 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372125 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372125 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372125 Gene

Proteins for LOC105372125 Gene

Post-translational modifications for LOC105372125 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372125 Gene

Domains & Families for LOC105372125 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372125 Gene

Function for LOC105372125 Gene

Phenotypes From GWAS Catalog for LOC105372125 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372125 Gene

Localization for LOC105372125 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372125 Gene

Pathways & Interactions for LOC105372125 Gene

SuperPathways for LOC105372125 Gene

No Data Available

Interacting Proteins for LOC105372125 Gene

Gene Ontology (GO) - Biological Process for LOC105372125 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372125 Gene

Drugs & Compounds for LOC105372125 Gene

No Compound Related Data Available

Transcripts for LOC105372125 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372125 Gene

No ASD Table

Relevant External Links for LOC105372125 Gene

GeneLoc Exon Structure for
LOC105372125

No data available for mRNA/cDNA for LOC105372125 Gene

Expression for LOC105372125 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372125 Gene

Orthologs for LOC105372125 Gene

No data available for Orthologs and Evolution for LOC105372125 Gene

Paralogs for LOC105372125 Gene

No data available for Paralogs for LOC105372125 Gene

Variants for LOC105372125 Gene

Sequence variations from dbSNP and Humsavar for LOC105372125 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000654489 -- 55,082,673(-) C/T intron_variant
rs1000711913 -- 55,086,313(-) T/C upstream_transcript_variant
rs1000722401 -- 55,081,210(-) C/T intron_variant
rs1000852287 -- 55,079,366(-) C/A intron_variant
rs1000940023 -- 55,083,059(-) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372125 Gene

Disorders for LOC105372125 Gene

No disorders were found for LOC105372125 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372125 Gene

Publications for LOC105372125 Gene

No publications were found for LOC105372125 Gene.

Products for LOC105372125 Gene

Sources for LOC105372125 Gene

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