Aliases for LOC105372125 Gene
Subcategory (RNA class) for LOC105372125 Gene
ncRNA
Quality Score for this RNA gene is
13
Aliases for LOC105372125 Gene
- Uncharacterized LOC105372125 3
External Ids for LOC105372125 Gene
- Entrez Gene: 105372125
Previous GeneCards Identifiers for LOC105372125 Gene
- GC18U901126
Summaries for LOC105372125 Gene
GeneCards Summary for LOC105372125 Gene
LOC105372125 (Uncharacterized LOC105372125) is an RNA Gene, and is affiliated with the ncRNA class.
Additional gene information for LOC105372125 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372125 Gene
Genomics for LOC105372125 Gene
GeneHancer (GH) Regulatory Elements for LOC105372125 Gene
Promoters and enhancers for LOC105372125 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH18J055096 | Enhancer | 1 | Ensembl ENCODE | 0.4 | -12.2 | -12226 | 2.4 | PKNOX1 ZSCAN4 KLF17 RAD21 RFX5 ZNF366 SCRT2 EGR2 ZNF654 RXRA | LINC01929 LOC105372125 | |
| GH18J055069 | Enhancer | 1 | FANTOM5 ENCODE | 0.4 | +15.7 | 15726 | 1.1 | HDGF PKNOX1 SMAD1 RB1 STAT5A BMI1 BATF KLF5 IRF4 ATF7 | GC18P055062 LOC105372125 | |
| GH18J055101 | Enhancer | 0.6 | ENCODE | 0.4 | -16.0 | -16006 | 0.5 | ZNF362 JUN CEBPB EP300 RFX5 SP1 JUND STAT3 FOSL2 RCOR1 | LOC105372125 LINC01929 | |
| GH18J055100 | Enhancer | 0.6 | ENCODE | 0.4 | -15.7 | -15662 | 0.2 | ZNF362 JUN CEBPB EP300 RFX5 SP1 JUND STAT3 FOSL2 RCOR1 | LOC105372125 LINC01929 | |
| GH18J055119 | Enhancer | 0.8 | ENCODE | 0.3 | -34.2 | -34172 | 0.1 | HDAC1 ARNT CHAMP1 TCF12 EGR1 NCOA1 NR2F2 ZNF148 MEF2D NFIC | LINC01929 LOC105372125 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC105372125 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for LOC105372125 Gene
Genomic Locations for LOC105372125 Gene
- chr18:55,079,050-55,085,363
- (GRCh38/hg38)
- Size:
- 6,314 bases
- Orientation:
- Minus strand
Genomic View for LOC105372125 Gene
Genes around LOC105372125 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 18q21.2 by Entrez Gene
LOC105372125 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC105372125 Gene
Proteins for LOC105372125 Gene
Post-translational modifications for LOC105372125 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for LOC105372125
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105372125
- Origene Custom Protein Services for LOC105372125
- Search GeneTex for Proteins for LOC105372125
No data available for DME Specific Peptides for LOC105372125 Gene
Domains & Families for LOC105372125 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372125 Gene
Function for LOC105372125 Gene
Phenotypes From GWAS Catalog for LOC105372125 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for LOC105372125
-
miRNA Products
Inhibitory RNA Products
Clone Products
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-
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- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372125 Gene
Localization for LOC105372125 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372125 Gene
Transcripts for LOC105372125 Gene
miRNA Products
Inhibitory RNA Products
Clone Products
- GenScript: Custom all cDNA clones Services for LOC105372125
- VectorBuilder custom plasmid, inducible vectors for LOC105372125
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LOC105372125
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Relevant External Links for LOC105372125 Gene
- GeneLoc Exon Structure for
- LOC105372125
No data available for mRNA/cDNA for LOC105372125 Gene
Expression for LOC105372125 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372125 Gene
Orthologs for LOC105372125 Gene
No data available for Orthologs and Evolution for LOC105372125 Gene
Paralogs for LOC105372125 Gene
No data available for Paralogs for LOC105372125 Gene
Variants for LOC105372125 Gene
| SNP ID | Clin | Chr 18 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000654489 | -- | 55,082,673(-) | C/T | intron_variant | |
| rs1000711913 | -- | 55,086,313(-) | T/C | upstream_transcript_variant | |
| rs1000722401 | -- | 55,081,210(-) | C/T | intron_variant | |
| rs1000852287 | -- | 55,079,366(-) | C/A | intron_variant | |
| rs1000940023 | -- | 55,083,059(-) | A/G | intron_variant |
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372125 Gene
Disorders for LOC105372125 Gene
No disorders were found for LOC105372125 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372125 Gene
Publications for LOC105372125 Gene
No publications were found for LOC105372125 Gene.
Products for LOC105372125 Gene
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- VectorBuilder custom plasmid, inducible vectors for LOC105372125
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LOC105372125
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Browse GeneCopoeia Cell Lines
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Sources for LOC105372125 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
- (159) GlyConnect
- (160) Aminode
- (161) GeneCopoeia
- (162) GPS-Prot
- (163) RNACentral
- (164) LncRNADisease
- (165) LOVD
- (166) miR2Disease
- (167) DiseaseEnhancer
- (168) Boster Bio
- (169) Biorbyt