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Aliases for LOC105372118 Gene

Subcategory (RNA class) for LOC105372118 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372118 Gene

  • Uncharacterized LOC105372118 3

External Ids for LOC105372118 Gene

Previous GeneCards Identifiers for LOC105372118 Gene

  • GC18U901097

Summaries for LOC105372118 Gene

GeneCards Summary for LOC105372118 Gene

LOC105372118 (Uncharacterized LOC105372118) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372118 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372118 Gene

Genomics for LOC105372118 Gene

GeneHancer (GH) Regulatory Elements for LOC105372118 Gene

Promoters and enhancers for LOC105372118 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J051189 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 650.7 +2.0 1987 9.4 HDGF FOXA2 PKNOX1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 IRF4 MEX3C LOC105372118 MBD1 SMAD4 CXXC1 PIR40243 GC18P050945
GH18J051211 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -15.2 -15193 1.2 HDGF ATF1 IRF4 ZNF766 ATF7 RUNX3 SP5 JUNB NCOA1 MEF2D MEX3C ME2 LOC105372118 GC18P050945
GH18J051188 Enhancer 0.7 ENCODE dbSUPER 0.4 +8.2 8249 0.3 HDGF PKNOX1 JUNB MEF2B MEX3C LOC105372118 PIR40243 GC18P050945
GH18J051182 Enhancer 0.5 dbSUPER 0.4 +13.1 13080 2.3 ZNF121 FOXA2 ZNF10 MZF1 CBFA2T3 CBFA2T2 PIR40243 LOC105372118 MEX3C GC18P050945
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372118 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372118 Gene

Genomic Locations for LOC105372118 Gene
chr18:51,192,906-51,196,548
(GRCh38/hg38)
Size:
3,643 bases
Orientation:
Minus strand

Genomic View for LOC105372118 Gene

Genes around LOC105372118 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372118 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372118 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372118 Gene

Proteins for LOC105372118 Gene

Post-translational modifications for LOC105372118 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372118 Gene

Domains & Families for LOC105372118 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372118 Gene

Function for LOC105372118 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372118 Gene

Localization for LOC105372118 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372118 Gene

Pathways & Interactions for LOC105372118 Gene

SuperPathways for LOC105372118 Gene

No Data Available

Interacting Proteins for LOC105372118 Gene

Gene Ontology (GO) - Biological Process for LOC105372118 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372118 Gene

Drugs & Compounds for LOC105372118 Gene

No Compound Related Data Available

Transcripts for LOC105372118 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372118 Gene

No ASD Table

Relevant External Links for LOC105372118 Gene

GeneLoc Exon Structure for
LOC105372118

No data available for mRNA/cDNA for LOC105372118 Gene

Expression for LOC105372118 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372118 Gene

Orthologs for LOC105372118 Gene

No data available for Orthologs and Evolution for LOC105372118 Gene

Paralogs for LOC105372118 Gene

No data available for Paralogs for LOC105372118 Gene

Variants for LOC105372118 Gene

Sequence variations from dbSNP and Humsavar for LOC105372118 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000635662 -- 51,192,520(-) C/T downstream_transcript_variant
rs1001432328 -- 51,194,521(-) A/G intron_variant
rs1001931495 -- 51,197,985(-) G/T upstream_transcript_variant
rs1002012390 -- 51,198,087(-) A/G upstream_transcript_variant
rs1003941717 -- 51,198,356(-) G/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372118 Gene

Disorders for LOC105372118 Gene

No disorders were found for LOC105372118 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372118 Gene

Publications for LOC105372118 Gene

No publications were found for LOC105372118 Gene.

Products for LOC105372118 Gene

Sources for LOC105372118 Gene

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