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Aliases for LOC105372117 Gene

Subcategory (RNA class) for LOC105372117 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372117 Gene

  • Uncharacterized LOC105372117 3

External Ids for LOC105372117 Gene

Previous GeneCards Identifiers for LOC105372117 Gene

  • GC18U900984

Summaries for LOC105372117 Gene

GeneCards Summary for LOC105372117 Gene

LOC105372117 (Uncharacterized LOC105372117) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC105372117 include Myhre Syndrome.

Additional gene information for LOC105372117 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372117 Gene

Genomics for LOC105372117 Gene

GeneHancer (GH) Regulatory Elements for LOC105372117 Gene

Promoters and enhancers for LOC105372117 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J051027 Promoter/Enhancer 1.5 Ensembl ENCODE 650.7 +0.2 223 4.5 HDGF PKNOX1 FOXA2 ARID4B SIN3A DMAP1 YY1 POLR2B KLF13 SP3 SMAD4 LOC105372117 GC18M051028 ME2 MRO RPL17P46 ENSG00000267699 GC18P050945
GH18J051036 Enhancer 1.1 Ensembl ENCODE 0.4 -8.2 -8232 4 FOXA2 MLX ARID4B ZNF48 ETS1 YY1 GLIS2 RXRA REST KAT8 RPL17P46 MRO ME2 LOC105372117 SMAD4 GC18M051107 ENSG00000267699 GC18P050945
GH18J051044 Enhancer 0.7 Ensembl 0.4 -14.7 -14732 0.2 MEIS2 PKNOX1 INSM2 FEZF1 BCL11B CTBP1 ZNF366 KLF7 EZH2 OVOL3 LOC105372117 SMAD4 GC18M051107 ENSG00000267699 GC18P050945
GH18J051049 Promoter 0.6 EPDnew 0.4 -19.1 -19138 0.1 NANOG SMAD4 RPL17P46 MRO LOC105372117 GC18M051107 ENSG00000267699 GC18P050945
GH18J051048 Promoter 0.5 EPDnew 0.4 -18.5 -18509 0.1 SMAD4 RPL17P46 MRO LOC105372117 GC18M051107 ENSG00000267699 GC18P050945
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372117 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372117 Gene

Genomic Locations for LOC105372117 Gene
chr18:51,025,096-51,030,169
(GRCh38/hg38)
Size:
5,074 bases
Orientation:
Minus strand

Genomic View for LOC105372117 Gene

Genes around LOC105372117 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372117 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372117 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372117 Gene

Proteins for LOC105372117 Gene

Post-translational modifications for LOC105372117 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372117 Gene

Domains & Families for LOC105372117 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372117 Gene

Function for LOC105372117 Gene

Phenotypes From GWAS Catalog for LOC105372117 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372117 Gene

Localization for LOC105372117 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372117 Gene

Pathways & Interactions for LOC105372117 Gene

SuperPathways for LOC105372117 Gene

No Data Available

Interacting Proteins for LOC105372117 Gene

Gene Ontology (GO) - Biological Process for LOC105372117 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372117 Gene

Drugs & Compounds for LOC105372117 Gene

No Compound Related Data Available

Transcripts for LOC105372117 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372117 Gene

No ASD Table

Relevant External Links for LOC105372117 Gene

GeneLoc Exon Structure for
LOC105372117

No data available for mRNA/cDNA for LOC105372117 Gene

Expression for LOC105372117 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372117 Gene

Orthologs for LOC105372117 Gene

No data available for Orthologs and Evolution for LOC105372117 Gene

Paralogs for LOC105372117 Gene

No data available for Paralogs for LOC105372117 Gene

Variants for LOC105372117 Gene

Sequence variations from dbSNP and Humsavar for LOC105372117 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1051119571 uncertain-significance, Myhre syndrome, Osler hemorrhagic telangiectasia syndrome, Juvenile Polyposis 51,030,256(-) C/G upstream_transcript_variant
rs142196376 likely-benign, Hereditary cancer-predisposing syndrome 51,031,163(-) A/G upstream_transcript_variant
rs149534722 likely-benign, Hereditary cancer-predisposing syndrome 51,030,886(-) G/C upstream_transcript_variant
rs886053885 uncertain-significance, Myhre syndrome, Juvenile Polyposis, Osler hemorrhagic telangiectasia syndrome 51,030,243(-) CAACAACA/CAACA upstream_transcript_variant
rs886053887 uncertain-significance, Myhre syndrome, Juvenile Polyposis, Osler hemorrhagic telangiectasia syndrome 51,030,275(-) C/A/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372117 Gene

Disorders for LOC105372117 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LOC105372117 Gene - From: GeneCards

Disorder Aliases PubMed IDs
myhre syndrome
  • myhrs
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC105372117: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372117 Gene

Publications for LOC105372117 Gene

No publications were found for LOC105372117 Gene.

Products for LOC105372117 Gene

Sources for LOC105372117 Gene

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