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Aliases for LOC105372109 Gene

Aliases for LOC105372109 Gene

  • Uncharacterized LOC105372109 3
  • Uncharacterized Protein LOC105372109 3

External Ids for LOC105372109 Gene

Previous GeneCards Identifiers for LOC105372109 Gene

  • GC18U900983

Summaries for LOC105372109 Gene

GeneCards Summary for LOC105372109 Gene

LOC105372109 (Uncharacterized LOC105372109) is a Protein Coding gene.

Additional gene information for LOC105372109 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372109 Gene

Genomics for LOC105372109 Gene

GeneHancer (GH) Regulatory Elements for LOC105372109 Gene

Promoters and enhancers for LOC105372109 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J049019 Enhancer 1.4 Ensembl ENCODE dbSUPER 650.7 -1.4 -1428 3.1 HDGF CLOCK ARID4B SIN3A YBX1 ZNF2 SLC30A9 ZNF416 ZNF143 ZNF207 LOC105372109 RPL17 LOC100129878 DYM ZBTB7C
GH18J049020 Enhancer 1.1 ENCODE dbSUPER 650.7 +0.2 205 0.2 HDGF ZNF493 ZNF133 YBX1 GLI4 ZNF2 GLIS2 ZNF416 ZNF548 YY2 LOC105372109 RPL17 LOC100129878 ENSG00000280335
GH18J049016 Enhancer 1.1 Ensembl ENCODE 0.7 +2.3 2344 2.5 ARID4B FEZF1 ZNF2 GLIS2 FOS KLF13 GLIS1 PRDM4 WT1 SP7 RPL17 LOC105372109 ENSG00000280335
GH18J049013 Enhancer 0.7 ENCODE dbSUPER 0.4 +6.2 6217 1 ZFHX2 CBFA2T3 ZBTB20 EGR2 ENSG00000280335 SMAD7 LOC105372109
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372109 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372109 Gene

Genomic Locations for LOC105372109 Gene
chr18:49,017,679-49,019,771
(GRCh38/hg38)
Size:
2,093 bases
Orientation:
Minus strand

Genomic View for LOC105372109 Gene

Genes around LOC105372109 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372109 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372109 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372109 Gene

Proteins for LOC105372109 Gene

Post-translational modifications for LOC105372109 Gene

No Post-translational modifications

Other Protein References for LOC105372109 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC105372109 Gene

Domains & Families for LOC105372109 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372109 Gene

Function for LOC105372109 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372109 Gene

Localization for LOC105372109 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372109 Gene

Pathways & Interactions for LOC105372109 Gene

SuperPathways for LOC105372109 Gene

No Data Available

Interacting Proteins for LOC105372109 Gene

Gene Ontology (GO) - Biological Process for LOC105372109 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372109 Gene

Drugs & Compounds for LOC105372109 Gene

No Compound Related Data Available

Transcripts for LOC105372109 Gene

mRNA/cDNA for LOC105372109 Gene

(1) REFSEQ mRNAs :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372109 Gene

No ASD Table

Relevant External Links for LOC105372109 Gene

GeneLoc Exon Structure for
LOC105372109

Expression for LOC105372109 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372109 Gene

Orthologs for LOC105372109 Gene

No data available for Orthologs and Evolution for LOC105372109 Gene

Paralogs for LOC105372109 Gene

No data available for Paralogs for LOC105372109 Gene

Variants for LOC105372109 Gene

Sequence variations from dbSNP and Humsavar for LOC105372109 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000135740 -- 49,017,369(-) T/C 3_prime_UTR_variant
rs1000298753 -- 49,017,158(-) G/C 3_prime_UTR_variant
rs1001038181 -- 49,018,610(-) G/A 3_prime_UTR_variant
rs1001113299 -- 49,020,839(-) A/T upstream_transcript_variant
rs1001464444 -- 49,020,230(-) G/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372109 Gene

Disorders for LOC105372109 Gene

No disorders were found for LOC105372109 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372109 Gene

Publications for LOC105372109 Gene

No publications were found for LOC105372109 Gene.

Products for LOC105372109 Gene

Sources for LOC105372109 Gene

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