Aliases for LOC105372108 Gene

Subcategory (RNA class) for LOC105372108 Gene

ncRNA

Aliases for LOC105372108 Gene

  • Uncharacterized LOC105372108 3

External Ids for LOC105372108 Gene

Previous GeneCards Identifiers for LOC105372108 Gene

  • GC18U900883

Summaries for LOC105372108 Gene

GeneCards Summary for LOC105372108 Gene

LOC105372108 (Uncharacterized LOC105372108) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372108 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372108 Gene

Genomics for LOC105372108 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105372108 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J048962 Enhancer 0.9 ENCODE dbSUPER 600.7 +1.6 1586 2.3 PRDM10 IKZF1 PKNOX1 ZNF24 ZNF740 CTCF SP2 CEBPB NFE2 NR2C2 LOC105372108 RPL17 LOC100129878 HSALNG0121462 ENSG00000266905 SMAD7 DYM
GH18J048973 Promoter/Enhancer 1.8 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 -9.9 -9941 3.7 HNRNPL PRDM10 ZNF692 BACH1 LARP7 PRDM1 ZNF143 ZNF776 ZIC2 ZSCAN4 ENSG00000266905 lnc-SMAD7-1 RPL17 LOC100129878 SMAD7 LOC105372108 DYM
GH18J048958 Enhancer 1 ENCODE dbSUPER 0.7 +4.8 4804 2.9 TEAD4 ZNF629 JUND PRDM1 ZIC2 ZNF501 ZNF600 ZNF341 KLF9 ZXDB ENSG00000265496 LOC105372108 HSALNG0121462 SMAD7 ENSG00000266905 DYM
GH18J048968 Enhancer 0.6 Ensembl ENCODE 0.7 -3.8 -3767 1.4 ZNF366 NANOG EGR1 NR3C1 EZH2 LOC105372108 ENSG00000266905 lnc-SMAD7-1 SMAD7 DYM
GH18J048959 Enhancer 0.3 ENCODE dbSUPER 0.4 +6.9 6927 0.2 HSALNG0121462 LOC105372108 SMAD7 DYM
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372108 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105372108 Gene

Genomic Locations for LOC105372108 Gene
chr18:48,962,065-48,965,133
(GRCh38/hg38)
Size:
3,069 bases
Orientation:
Minus strand

Genomic View for LOC105372108 Gene

Genes around LOC105372108 on UCSC Golden Path with GeneCards custom track
LOC105372108 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105372108 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372108 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372108 Gene

Proteins for LOC105372108 Gene

Post-translational modifications for LOC105372108 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372108 Gene

Domains & Families for LOC105372108 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372108 Gene

Function for LOC105372108 Gene

Phenotypes From GWAS Catalog for LOC105372108 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372108 Gene

Localization for LOC105372108 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372108 Gene

Pathways & Interactions for LOC105372108 Gene

PathCards logo

SuperPathways for LOC105372108 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105372108 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372108 Gene

Drugs & Compounds for LOC105372108 Gene

No Compound Related Data Available

Transcripts for LOC105372108 Gene

LOC105372108 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372108 Gene

No ASD Table

Relevant External Links for LOC105372108 Gene

GeneLoc Exon Structure for
LOC105372108

No data available for mRNA/cDNA for LOC105372108 Gene

Expression for LOC105372108 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372108 Gene

Orthologs for LOC105372108 Gene

No data available for Orthologs and Evolution for LOC105372108 Gene

Paralogs for LOC105372108 Gene

No data available for Paralogs for LOC105372108 Gene

Variants for LOC105372108 Gene

Additional dbSNP identifiers (rs#s) for LOC105372108 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372108 Gene

Disorders for LOC105372108 Gene

No disorders were found for LOC105372108 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372108 Gene

Publications for LOC105372108 Gene

No publications were found for LOC105372108 Gene.

No data available for Mastermind for LOC105372108 Gene

Products for LOC105372108 Gene

Sources for LOC105372108 Gene