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Aliases for LOC105372106 Gene

Subcategory (RNA class) for LOC105372106 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105372106 Gene

  • Uncharacterized LOC105372106 3

External Ids for LOC105372106 Gene

Previous GeneCards Identifiers for LOC105372106 Gene

  • GC18U901140

Summaries for LOC105372106 Gene

GeneCards Summary for LOC105372106 Gene

LOC105372106 (Uncharacterized LOC105372106) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372106 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372106 Gene

Genomics for LOC105372106 Gene

GeneHancer (GH) Regulatory Elements for LOC105372106 Gene

Promoters and enhancers for LOC105372106 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I048798 Enhancer 1 FANTOM5 ENCODE dbSUPER 550.8 -0.1 -131 0.4 MEIS2 ATF1 CBFA2T3 EBF1 ATF2 MEF2D RCOR1 ATF7 CREM SPI1 LOC105372106 LOC105372105 CTIF
GH18I048799 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.8 -2.8 -2844 4.9 HDGF PKNOX1 ATF1 BMI1 BATF KLF5 IRF4 RAD21 YY1 ZNF207 LOC105372106 LOC105372105 CTIF
GH18I048779 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +16.7 16714 4.6 PKNOX1 FOXA2 MLX ARNT ARID4B DMAP1 YY1 ZNF766 FOS SP5 SMAD7 LOC105372106 ENSG00000279250 CTIF
GH18I048783 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +12.9 12881 2.5 HDGF PKNOX1 SMAD1 RB1 ZNF493 BMI1 YBX1 BATF IRF4 ZNF366 SMAD7 LOC105372106 ENSG00000279250 CTIF
GH18I048812 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -16.6 -16575 4.5 MEIS2 KLF1 LEF1 ATF1 CEBPG BATF KLF5 IRF4 RELA POLR2A SMAD7 ZBTB7C LOC105372106 LOC105372105 CTIF
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372106 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372106 Gene

Genomic Locations for LOC105372106 Gene
chr18:48,794,110-48,798,095
(GRCh38/hg38)
Size:
3,986 bases
Orientation:
Minus strand

Genomic View for LOC105372106 Gene

Genes around LOC105372106 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372106 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372106 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372106 Gene

Proteins for LOC105372106 Gene

Post-translational modifications for LOC105372106 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372106 Gene

Domains & Families for LOC105372106 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372106 Gene

Function for LOC105372106 Gene

Phenotypes From GWAS Catalog for LOC105372106 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372106 Gene

Localization for LOC105372106 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372106 Gene

Pathways & Interactions for LOC105372106 Gene

SuperPathways for LOC105372106 Gene

No Data Available

Interacting Proteins for LOC105372106 Gene

Gene Ontology (GO) - Biological Process for LOC105372106 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372106 Gene

Drugs & Compounds for LOC105372106 Gene

No Compound Related Data Available

Transcripts for LOC105372106 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372106 Gene

No ASD Table

Relevant External Links for LOC105372106 Gene

GeneLoc Exon Structure for
LOC105372106

No data available for mRNA/cDNA for LOC105372106 Gene

Expression for LOC105372106 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372106 Gene

Orthologs for LOC105372106 Gene

No data available for Orthologs and Evolution for LOC105372106 Gene

Paralogs for LOC105372106 Gene

No data available for Paralogs for LOC105372106 Gene

Variants for LOC105372106 Gene

Sequence variations from dbSNP and Humsavar for LOC105372106 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000077125 -- 48,796,129(-) G/T intron_variant
rs1000143046 -- 48,796,595(-) A/C intron_variant
rs1001093330 -- 48,797,515(-) A/C intron_variant
rs1001305232 -- 48,796,791(-) G/A intron_variant
rs1001370398 -- 48,796,060(-) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372106 Gene

Disorders for LOC105372106 Gene

No disorders were found for LOC105372106 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372106 Gene

Publications for LOC105372106 Gene

No publications were found for LOC105372106 Gene.

Products for LOC105372106 Gene

Sources for LOC105372106 Gene

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