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Aliases for LOC105372105 Gene

Subcategory (RNA class) for LOC105372105 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105372105 Gene

  • Uncharacterized LOC105372105 3
  • AC093567.1 5

External Ids for LOC105372105 Gene

Previous GeneCards Identifiers for LOC105372105 Gene

  • GC18U900968

Summaries for LOC105372105 Gene

GeneCards Summary for LOC105372105 Gene

LOC105372105 (Uncharacterized LOC105372105) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372105 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372105 Gene

Genomics for LOC105372105 Gene

GeneHancer (GH) Regulatory Elements for LOC105372105 Gene

Promoters and enhancers for LOC105372105 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I048838 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 550.8 +0.6 569 6 ZNF266 CEBPG FEZF1 ZIC2 RAD21 RARA ZFHX2 EGR1 SCRT2 FOS LOC105372105 SMAD7 LOC100129878 RPL17 LOC105372106 CTIF
GH18I048824 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +14.0 13984 5.7 PKNOX1 ARNT FEZF1 TCF12 ZNF121 GLIS2 GATA2 KLF7 SP3 NCOA1 SMAD7 LOC105372105 LOC105372106 CTIF
GH18I048921 Promoter/Enhancer 2.9 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.2 -95.9 -95946 32.1 MLX FEZF1 DMAP1 IRF4 YY1 ZNF213 ZNF548 ZNF263 SP3 NFYC SMAD7 RPL17 LIPG LOC105372105
GH18I048872 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -31.8 -31767 2 ZFP64 FEZF1 ZNF213 ZNF548 FOS SP3 ZC3H11A REST ZNF592 ZNF610 RPL17 LOC100129878 SMAD2 CTIF ZBTB7C SMAD7 LOC105372105
GH18I048831 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +8.3 8285 4.6 PKNOX1 KLF17 SIN3A BATF ZSCAN5C ZNF143 ATF7 ETV6 FOS IKZF2 SMAD7 LOC105372105 LOC105372106 CTIF
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372105 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372105 Gene

Genomic Locations for LOC105372105 Gene
chr18:48,817,796-48,841,796
(GRCh38/hg38)
Size:
24,001 bases
Orientation:
Minus strand
chr18:46,352,422-46,361,141
(GRCh37/hg19)

Genomic View for LOC105372105 Gene

Genes around LOC105372105 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372105 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372105 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372105 Gene

Proteins for LOC105372105 Gene

Post-translational modifications for LOC105372105 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372105 Gene

Domains & Families for LOC105372105 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372105 Gene

Function for LOC105372105 Gene

Phenotypes From GWAS Catalog for LOC105372105 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372105 Gene

Localization for LOC105372105 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372105 Gene

Pathways & Interactions for LOC105372105 Gene

SuperPathways for LOC105372105 Gene

No Data Available

Interacting Proteins for LOC105372105 Gene

Gene Ontology (GO) - Biological Process for LOC105372105 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372105 Gene

Drugs & Compounds for LOC105372105 Gene

No Compound Related Data Available

Transcripts for LOC105372105 Gene

mRNA/cDNA for LOC105372105 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372105 Gene

No ASD Table

Relevant External Links for LOC105372105 Gene

GeneLoc Exon Structure for
LOC105372105

Expression for LOC105372105 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372105 Gene

Orthologs for LOC105372105 Gene

Evolution for LOC105372105 Gene

ENSEMBL:
Gene Tree for LOC105372105 (if available)
TreeFam:
Gene Tree for LOC105372105 (if available)

No data available for Orthologs for LOC105372105 Gene

Paralogs for LOC105372105 Gene

No data available for Paralogs for LOC105372105 Gene

Variants for LOC105372105 Gene

Sequence variations from dbSNP and Humsavar for LOC105372105 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000031 -- 48,835,070(-) G/A intron_variant
rs1000095033 -- 48,836,083(-) G/A intron_variant
rs1000149971 -- 48,834,867(-) G/A non_coding_transcript_variant
rs1001075635 -- 48,842,824(-) G/A non_coding_transcript_variant
rs1001162856 -- 48,841,814(-) G/A non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372105 Gene

Disorders for LOC105372105 Gene

No disorders were found for LOC105372105 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372105 Gene

Publications for LOC105372105 Gene

No publications were found for LOC105372105 Gene.

Products for LOC105372105 Gene

Sources for LOC105372105 Gene

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