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Aliases for LOC105372104 Gene

Subcategory (RNA class) for LOC105372104 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105372104 Gene

  • Uncharacterized LOC105372104 3

External Ids for LOC105372104 Gene

Previous GeneCards Identifiers for LOC105372104 Gene

  • GC18U900889

Summaries for LOC105372104 Gene

GeneCards Summary for LOC105372104 Gene

LOC105372104 (Uncharacterized LOC105372104) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372104 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372104 Gene

Genomics for LOC105372104 Gene

GeneHancer (GH) Regulatory Elements for LOC105372104 Gene

Promoters and enhancers for LOC105372104 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J048160 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +2.4 2413 9.4 FOXA2 MLX YY1 GLIS2 KLF7 SP3 RXRA NFYC REST PPARG IER3IP1 LOC105372104 GC18M048170 RNU6-708P GC18M048089 ZBTB7C
GH18J048151 Enhancer 1.1 ENCODE dbSUPER 0.4 -9.5 -9529 3.6 PKNOX1 FOXA2 ARID4B ZNF48 YY1 DEK NFKBIZ RXRA REST PPARG ENSG00000278891 LOC105372104 GC18M048089 ZBTB7C
GH18J048157 Enhancer 0.4 dbSUPER 0.7 -4.1 -4131 2 CTCF ZFHX2 GATA3 LOC105372104 ENSG00000278891 GC18M048089 ZBTB7C
GH18J048159 Enhancer 0.4 ENCODE dbSUPER 0.7 -2.5 -2453 0.1 LOC105372104 ENSG00000278891 GC18M048089 ZBTB7C
GH18J048155 Enhancer 0.5 ENCODE dbSUPER 0.4 -6.1 -6051 1.4 CEBPB ENSG00000278891 LOC105372104 GC18M048089 ZBTB7C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372104 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372104 Gene

Genomic Locations for LOC105372104 Gene
chr18:48,162,404-48,185,405
(GRCh38/hg38)
Size:
23,002 bases
Orientation:
Plus strand

Genomic View for LOC105372104 Gene

Genes around LOC105372104 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372104 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372104 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372104 Gene

Proteins for LOC105372104 Gene

Post-translational modifications for LOC105372104 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372104 Gene

Domains & Families for LOC105372104 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372104 Gene

Function for LOC105372104 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372104 Gene

Localization for LOC105372104 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372104 Gene

Pathways & Interactions for LOC105372104 Gene

SuperPathways for LOC105372104 Gene

No Data Available

Interacting Proteins for LOC105372104 Gene

Gene Ontology (GO) - Biological Process for LOC105372104 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372104 Gene

Drugs & Compounds for LOC105372104 Gene

No Compound Related Data Available

Transcripts for LOC105372104 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372104 Gene

No ASD Table

Relevant External Links for LOC105372104 Gene

GeneLoc Exon Structure for
LOC105372104

No data available for mRNA/cDNA for LOC105372104 Gene

Expression for LOC105372104 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372104 Gene

Orthologs for LOC105372104 Gene

No data available for Orthologs and Evolution for LOC105372104 Gene

Paralogs for LOC105372104 Gene

No data available for Paralogs for LOC105372104 Gene

Variants for LOC105372104 Gene

Sequence variations from dbSNP and Humsavar for LOC105372104 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000128659 -- 48,164,829(+) A/C genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000230925 -- 48,182,541(+) G/A downstream_transcript_variant, genic_downstream_transcript_variant, non_coding_transcript_variant
rs1000310436 -- 48,164,439(+) C/T genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000394189 -- 48,165,158(+) T/C genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000855089 -- 48,170,575(+) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372104 Gene

Disorders for LOC105372104 Gene

No disorders were found for LOC105372104 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372104 Gene

Publications for LOC105372104 Gene

No publications were found for LOC105372104 Gene.

Products for LOC105372104 Gene

Sources for LOC105372104 Gene

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