Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105372093 Gene

Subcategory (RNA class) for LOC105372093 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105372093 Gene

  • Uncharacterized LOC105372093 3
  • AC023421.2 5

External Ids for LOC105372093 Gene

Previous GeneCards Identifiers for LOC105372093 Gene

  • GC18U901039

Summaries for LOC105372093 Gene

GeneCards Summary for LOC105372093 Gene

LOC105372093 (Uncharacterized LOC105372093) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372093 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372093 Gene

Genomics for LOC105372093 Gene

GeneHancer (GH) Regulatory Elements for LOC105372093 Gene

Promoters and enhancers for LOC105372093 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I045782 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 550.8 -0.7 -690 2.4 SRF EBF1 BATF LOC105372093 SLC14A1 EPG5 ENSG00000267558
GH18I045785 Enhancer 0.6 Ensembl ENCODE dbSUPER 0.8 -2.6 -2628 0.9 SIGLEC15 EPG5 ENSG00000267558 LOC105372093
GH18I045773 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +7.9 7922 2.6 RB1 FEZF1 ZBTB40 RAD21 YY1 ZNF143 BCLAF1 IKZF2 SP3 HCFC1 SIGLEC15 LOC105372093 GC18M045733
GH18I045771 Enhancer 0.7 FANTOM5 ENCODE 0.4 +10.9 10891 1 ZFHX2 SOX6 SIGLEC15 SLC14A1 LOC105372093 GC18M045733
GH18I045685 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +95.0 95047 3.7 HDGF HDAC1 SMAD1 TCF12 ZNF766 ZNF143 IKZF2 RUNX3 CBFB REST SLC14A1 EPG5 LOC105372092 ENSG00000266968 LOC105372093
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372093 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372093 Gene

Genomic Locations for LOC105372093 Gene
chr18:45,669,367-45,782,818
(GRCh38/hg38)
Size:
113,452 bases
Orientation:
Minus strand
chr18:43,249,332-43,327,180
(GRCh37/hg19)

Genomic View for LOC105372093 Gene

Genes around LOC105372093 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372093 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372093 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372093 Gene

Proteins for LOC105372093 Gene

Post-translational modifications for LOC105372093 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372093 Gene

Domains & Families for LOC105372093 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372093 Gene

Function for LOC105372093 Gene

Phenotypes From GWAS Catalog for LOC105372093 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372093 Gene

Localization for LOC105372093 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372093 Gene

Pathways & Interactions for LOC105372093 Gene

SuperPathways for LOC105372093 Gene

No Data Available

Interacting Proteins for LOC105372093 Gene

Gene Ontology (GO) - Biological Process for LOC105372093 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372093 Gene

Drugs & Compounds for LOC105372093 Gene

No Compound Related Data Available

Transcripts for LOC105372093 Gene

mRNA/cDNA for LOC105372093 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372093 Gene

No ASD Table

Relevant External Links for LOC105372093 Gene

GeneLoc Exon Structure for
LOC105372093

Expression for LOC105372093 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372093 Gene

Orthologs for LOC105372093 Gene

Evolution for LOC105372093 Gene

ENSEMBL:
Gene Tree for LOC105372093 (if available)
TreeFam:
Gene Tree for LOC105372093 (if available)

No data available for Orthologs for LOC105372093 Gene

Paralogs for LOC105372093 Gene

No data available for Paralogs for LOC105372093 Gene

Variants for LOC105372093 Gene

Sequence variations from dbSNP and Humsavar for LOC105372093 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1058396 benign, KIDD BLOOD POLYMORPHISM Jk(a)/Jk(b) 45,739,554(-) G/A intron_variant
rs78242949 pathogenic, Jk-null variant, finnish type 45,739,587(-) T/C intron_variant
rs1000008899 -- 45,650,712(-) A/T genic_downstream_transcript_variant, intron_variant
rs1000012987 -- 45,746,082(-) C/T intron_variant
rs1000016060 -- 45,686,425(-) C/T genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372093 Gene

Disorders for LOC105372093 Gene

No disorders were found for LOC105372093 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372093 Gene

Publications for LOC105372093 Gene

No publications were found for LOC105372093 Gene.

Products for LOC105372093 Gene

Sources for LOC105372093 Gene

Content
Loading form....