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Aliases for LOC105372089 Gene

Subcategory (RNA class) for LOC105372089 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105372089 Gene

  • Uncharacterized LOC105372089 3

External Ids for LOC105372089 Gene

Previous GeneCards Identifiers for LOC105372089 Gene

  • GC18U900876

Summaries for LOC105372089 Gene

GeneCards Summary for LOC105372089 Gene

LOC105372089 (Uncharacterized LOC105372089) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372089 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372089 Gene

Genomics for LOC105372089 Gene

GeneHancer (GH) Regulatory Elements for LOC105372089 Gene

Promoters and enhancers for LOC105372089 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I044654 Enhancer 0.9 Ensembl ENCODE 0.4 +9.9 9876 1.2 STAT1 MXI1 JUN MAX CEBPB FEZF1 EP300 RAD21 SP1 GATA3 GC18M044646 LOC105372089
GH18I044651 Enhancer 0.8 ENCODE 0.4 +12.8 12814 1.2 PKNOX1 RFX5 ZNF335 RCOR1 FOS ZNF362 CEBPB ZNF398 ZEB2 SP1 SETBP1 GC18M044646 LOC105372089
GH18I044668 Enhancer 0.2 ENCODE 0.8 -4.2 -4182 0.1 LOC105372089 LOC101927943
GH18I044673 Enhancer 0.4 ENCODE 0.4 -9.1 -9052 0.2 RFX1 BMI1 LOC101927943 LOC105372089
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372089 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372089 Gene

Genomic Locations for LOC105372089 Gene
chr18:44,658,455-44,664,659
(GRCh38/hg38)
Size:
6,205 bases
Orientation:
Minus strand

Genomic View for LOC105372089 Gene

Genes around LOC105372089 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372089 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372089 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372089 Gene

Proteins for LOC105372089 Gene

Post-translational modifications for LOC105372089 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372089 Gene

Domains & Families for LOC105372089 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372089 Gene

Function for LOC105372089 Gene

Phenotypes From GWAS Catalog for LOC105372089 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372089 Gene

Localization for LOC105372089 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372089 Gene

Pathways & Interactions for LOC105372089 Gene

SuperPathways for LOC105372089 Gene

No Data Available

Interacting Proteins for LOC105372089 Gene

Gene Ontology (GO) - Biological Process for LOC105372089 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372089 Gene

Drugs & Compounds for LOC105372089 Gene

No Compound Related Data Available

Transcripts for LOC105372089 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372089 Gene

No ASD Table

Relevant External Links for LOC105372089 Gene

GeneLoc Exon Structure for
LOC105372089

No data available for mRNA/cDNA for LOC105372089 Gene

Expression for LOC105372089 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372089 Gene

Orthologs for LOC105372089 Gene

No data available for Orthologs and Evolution for LOC105372089 Gene

Paralogs for LOC105372089 Gene

No data available for Paralogs for LOC105372089 Gene

Variants for LOC105372089 Gene

Sequence variations from dbSNP and Humsavar for LOC105372089 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000787195 -- 44,659,822(-) G/A intron_variant
rs1001266666 -- 44,666,579(-) C/T upstream_transcript_variant
rs1001462408 -- 44,662,353(-) C/A intron_variant
rs1002202915 -- 44,662,613(-) T/C intron_variant
rs1002443982 -- 44,660,690(-) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372089 Gene

Disorders for LOC105372089 Gene

No disorders were found for LOC105372089 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372089 Gene

Publications for LOC105372089 Gene

No publications were found for LOC105372089 Gene.

Products for LOC105372089 Gene

Sources for LOC105372089 Gene

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