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Aliases for LOC105372071 Gene

Subcategory (RNA class) for LOC105372071 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105372071 Gene

  • Uncharacterized LOC105372071 3

External Ids for LOC105372071 Gene

Previous GeneCards Identifiers for LOC105372071 Gene

  • GC18U900885

Summaries for LOC105372071 Gene

GeneCards Summary for LOC105372071 Gene

LOC105372071 (Uncharacterized LOC105372071) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372071 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372071 Gene

Genomics for LOC105372071 Gene

GeneHancer (GH) Regulatory Elements for LOC105372071 Gene

Promoters and enhancers for LOC105372071 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I036671 Enhancer 0.8 Ensembl ENCODE 0.4 -9.4 -9365 1.9 PKNOX1 MAFG CEBPB FEZF1 CEBPG EP300 ZNF217 PRDM6 ZSCAN5C STAT3 TPGS2 LOC105372071 KIAA1328 FHOD3
GH18I036578 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +83.1 83076 3.8 SRF ETV1 HLF CEBPG ATF2 ATF4 JUND POLR2A IKZF1 GLIS1 FHOD3 LOC105372071 GC18P036374
GH18I036691 Enhancer 0.8 Ensembl ENCODE 0.3 -29.7 -29728 3.3 TFAP4 FOXA2 FOXA3 BATF ZNF7 TEAD3 JUND POLR2A CEBPA GLIS1 TPGS2 LOC105372071 KIAA1328 FHOD3
GH18I036572 Enhancer 1 Ensembl ENCODE dbSUPER 0.2 +91.2 91154 0.4 CTCF PKNOX1 ZNF687 ZNF654 TRIM22 REST ELF1 RAD21 ZFHX2 TARDBP LOC105372071 GC18P036374 FHOD3
GH18I036827 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.1 -165.4 -165393 3.3 HDGF FOXA2 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B ZNF766 TPGS2 KIAA1328 ENSG00000267707 LOC105372071
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372071 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372071 Gene

Genomic Locations for LOC105372071 Gene
chr18:36,660,268-36,663,555
(GRCh38/hg38)
Size:
3,288 bases
Orientation:
Minus strand

Genomic View for LOC105372071 Gene

Genes around LOC105372071 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372071 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372071 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372071 Gene

Proteins for LOC105372071 Gene

Post-translational modifications for LOC105372071 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372071 Gene

Domains & Families for LOC105372071 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372071 Gene

Function for LOC105372071 Gene

Phenotypes From GWAS Catalog for LOC105372071 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372071 Gene

Localization for LOC105372071 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372071 Gene

Pathways & Interactions for LOC105372071 Gene

SuperPathways for LOC105372071 Gene

No Data Available

Interacting Proteins for LOC105372071 Gene

Gene Ontology (GO) - Biological Process for LOC105372071 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372071 Gene

Drugs & Compounds for LOC105372071 Gene

No Compound Related Data Available

Transcripts for LOC105372071 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372071 Gene

No ASD Table

Relevant External Links for LOC105372071 Gene

GeneLoc Exon Structure for
LOC105372071

No data available for mRNA/cDNA for LOC105372071 Gene

Expression for LOC105372071 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372071 Gene

Orthologs for LOC105372071 Gene

No data available for Orthologs and Evolution for LOC105372071 Gene

Paralogs for LOC105372071 Gene

No data available for Paralogs for LOC105372071 Gene

Variants for LOC105372071 Gene

Sequence variations from dbSNP and Humsavar for LOC105372071 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000224063 -- 36,662,376(-) C/T intron_variant
rs1000441636 -- 36,663,874(-) A/G upstream_transcript_variant
rs1001187257 -- 36,664,640(-) A/G upstream_transcript_variant
rs1001948713 -- 36,660,848(-) G/T intron_variant
rs1002271094 -- 36,663,891(-) A/C/G upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372071 Gene

Disorders for LOC105372071 Gene

Additional Disease Information for LOC105372071

No disorders were found for LOC105372071 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105372071 Gene

Publications for LOC105372071 Gene

No publications were found for LOC105372071 Gene.

Products for LOC105372071 Gene

Sources for LOC105372071 Gene

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