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Aliases for LOC105372066 Gene

Subcategory (RNA class) for LOC105372066 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105372066 Gene

  • Uncharacterized LOC105372066 3
  • AC118757.1 5

External Ids for LOC105372066 Gene

Previous GeneCards Identifiers for LOC105372066 Gene

  • GC18U900870

Summaries for LOC105372066 Gene

GeneCards Summary for LOC105372066 Gene

LOC105372066 (Uncharacterized LOC105372066) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372066 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372066 Gene

Genomics for LOC105372066 Gene

GeneHancer (GH) Regulatory Elements for LOC105372066 Gene

Promoters and enhancers for LOC105372066 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I035967 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 560.5 +1.7 1669 5.8 HDGF PKNOX1 MLX ARNT ARID4B SIN3A DMAP1 YY1 SLC30A9 POLR2B C18orf21 LOC105372066 ENSG00000278986 ENSG00000268573 ZNF397 ELP2 RPRD1A GC18M035972 GC18P035965
GH18I036065 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 8.9 -94.2 -94219 2.9 HDGF PKNOX1 SMAD1 FOXA2 MLX ARID4B SIN3A DMAP1 IRF4 YY1 RPRD1A C18orf21 LOC105372066 GC18M035972
GH18I035949 Enhancer 1 Ensembl ENCODE 16.5 +22.1 22139 1.2 RB1 MZF1 RAD21 YY1 ZNF335 GLIS2 ZNF143 RCOR1 ZNF654 ZBTB11 LOC105372066 C18orf21 RPRD1A GC18P035965 MIR3929
GH18I035934 Enhancer 0.7 ENCODE 19.1 +38.3 38344 0.2 SREBF2 JUN MAX CEBPG FOSL1 GATA3 CTBP1 POLR3A TRIM24 ATF7 MIR3929 LOC105372066 MIR187 C18orf21 RPRD1A GC18P035965
GH18I035939 Enhancer 0.4 ENCODE 19.6 +33.1 33072 0.9 CTCF ZNF143 RAD21 LOC105372066 C18orf21 MIR187 MIR3929 GC18P035965
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372066 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372066 Gene

Genomic Locations for LOC105372066 Gene
chr18:35,951,803-35,972,527
(GRCh38/hg38)
Size:
20,725 bases
Orientation:
Minus strand
chr18:33,531,766-33,546,081
(GRCh37/hg19)

Genomic View for LOC105372066 Gene

Genes around LOC105372066 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372066 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372066 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372066 Gene

Proteins for LOC105372066 Gene

Post-translational modifications for LOC105372066 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372066 Gene

Domains & Families for LOC105372066 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372066 Gene

Function for LOC105372066 Gene

Phenotypes From GWAS Catalog for LOC105372066 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372066 Gene

Localization for LOC105372066 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372066 Gene

Pathways & Interactions for LOC105372066 Gene

SuperPathways for LOC105372066 Gene

No Data Available

Interacting Proteins for LOC105372066 Gene

Gene Ontology (GO) - Biological Process for LOC105372066 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372066 Gene

Drugs & Compounds for LOC105372066 Gene

No Compound Related Data Available

Transcripts for LOC105372066 Gene

mRNA/cDNA for LOC105372066 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372066 Gene

No ASD Table

Relevant External Links for LOC105372066 Gene

GeneLoc Exon Structure for
LOC105372066

Expression for LOC105372066 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372066 Gene

Orthologs for LOC105372066 Gene

Evolution for LOC105372066 Gene

ENSEMBL:
Gene Tree for LOC105372066 (if available)
TreeFam:
Gene Tree for LOC105372066 (if available)

No data available for Orthologs for LOC105372066 Gene

Paralogs for LOC105372066 Gene

No data available for Paralogs for LOC105372066 Gene

Variants for LOC105372066 Gene

Sequence variations from dbSNP and Humsavar for LOC105372066 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000110318 -- 35,959,290(-) G/T genic_downstream_transcript_variant, intron_variant
rs1000112589 -- 35,966,531(-) C/T intron_variant
rs1000352643 -- 35,954,872(-) G/A genic_downstream_transcript_variant, intron_variant
rs1000714680 -- 35,967,844(-) G/C intron_variant
rs1000738221 -- 35,973,643(-) A/G upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372066 Gene

Disorders for LOC105372066 Gene

No disorders were found for LOC105372066 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372066 Gene

Publications for LOC105372066 Gene

No publications were found for LOC105372066 Gene.

Products for LOC105372066 Gene

Sources for LOC105372066 Gene

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