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Aliases for LOC105372063 Gene

Subcategory (RNA class) for LOC105372063 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105372063 Gene

  • Uncharacterized LOC105372063 3
  • AC007998.4 5

External Ids for LOC105372063 Gene

Previous GeneCards Identifiers for LOC105372063 Gene

  • GC18U901088

Summaries for LOC105372063 Gene

GeneCards Summary for LOC105372063 Gene

LOC105372063 (Uncharacterized LOC105372063) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372063 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372063 Gene

Genomics for LOC105372063 Gene

GeneHancer (GH) Regulatory Elements for LOC105372063 Gene

Promoters and enhancers for LOC105372063 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I035407 Enhancer 1.3 FANTOM5 Ensembl ENCODE 550.8 +0.1 83 2.8 HDGF ELF3 PKNOX1 ATF1 FOXA2 RB1 ARID4B RAD21 RFX5 ZNF143 LOC105372063 ZNF396 GALNT1 RPL7AP67
GH18I035410 Enhancer 0.5 ENCODE 550.8 -1.7 -1658 0.1 SRF POLR2A IKZF1 IKZF2 RUNX3 LOC105372063 GALNT1 ENSG00000267583
GH18I035455 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -51.6 -51623 9.7 HDGF FOXA2 ARNT ARID4B CBX5 FOS ZHX2 REST ZNF592 KAT8 INO80C LOC101927809 ENSG00000267583 MAPRE2 ENSG00000267140 LOC105372063
GH18I035412 Enhancer 0.4 Ensembl 0.8 -3.8 -3827 0.2 POLR2A ZZZ3 ZNF397 ELP2 GALNT1 LOC105372063 ENSG00000267583
GH18I035386 Enhancer 0.9 Ensembl ENCODE 0.3 +22.4 22408 0.9 CTCF KLF1 FOXA2 ZBTB6 RB1 RAD21 ARID2 SMC3 ZNF143 CHD2 RPL7AP67 LOC105372063
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372063 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372063 Gene

Genomic Locations for LOC105372063 Gene
chr18:35,397,058-35,409,074
(GRCh38/hg38)
Size:
12,017 bases
Orientation:
Minus strand

Genomic View for LOC105372063 Gene

Genes around LOC105372063 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372063 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372063 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372063 Gene

Proteins for LOC105372063 Gene

Post-translational modifications for LOC105372063 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372063 Gene

Domains & Families for LOC105372063 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372063 Gene

Function for LOC105372063 Gene

Phenotypes From GWAS Catalog for LOC105372063 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372063 Gene

Localization for LOC105372063 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372063 Gene

Pathways & Interactions for LOC105372063 Gene

SuperPathways for LOC105372063 Gene

No Data Available

Interacting Proteins for LOC105372063 Gene

Gene Ontology (GO) - Biological Process for LOC105372063 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372063 Gene

Drugs & Compounds for LOC105372063 Gene

No Compound Related Data Available

Transcripts for LOC105372063 Gene

mRNA/cDNA for LOC105372063 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372063 Gene

No ASD Table

Relevant External Links for LOC105372063 Gene

GeneLoc Exon Structure for
LOC105372063

Expression for LOC105372063 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372063 Gene

Orthologs for LOC105372063 Gene

Evolution for LOC105372063 Gene

ENSEMBL:
Gene Tree for LOC105372063 (if available)
TreeFam:
Gene Tree for LOC105372063 (if available)

No data available for Orthologs for LOC105372063 Gene

Paralogs for LOC105372063 Gene

No data available for Paralogs for LOC105372063 Gene

Variants for LOC105372063 Gene

Sequence variations from dbSNP and Humsavar for LOC105372063 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000216701 -- 35,410,715(-) G/A/T upstream_transcript_variant
rs1000290098 -- 35,410,396(-) G/A upstream_transcript_variant
rs1000628994 -- 35,411,612(-) C/T upstream_transcript_variant
rs1000641028 -- 35,403,321(-) C/T intron_variant
rs1000658780 -- 35,411,350(-) A/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372063 Gene

Disorders for LOC105372063 Gene

No disorders were found for LOC105372063 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372063 Gene

Publications for LOC105372063 Gene

No publications were found for LOC105372063 Gene.

Products for LOC105372063 Gene

Sources for LOC105372063 Gene

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