Aliases for LOC105372049 Gene

Data sources for LOC105372049 Gene:

Subcategory (RNA class) for LOC105372049 Gene

ncRNA

Aliases for LOC105372049 Gene

External Ids for LOC105372049 Gene

Previous GeneCards Identifiers for LOC105372049 Gene

  • GC18U901081

Summaries for LOC105372049 Gene

GeneCards Summary for LOC105372049 Gene

LOC105372049 (Uncharacterized LOC105372049) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372049 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105372049 Gene

Genomics for LOC105372049 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105372049 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J031229 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.7 +2.6 2554 2.3 BCL11A FOXA2 TRIM22 IRF4 SAP130 RXRA RARA TEAD3 JUND FOSL1 DSC2 LOC105372049 piR-57133-275 lnc-DSG1-8 DSC1 DSG1
GH18J031240 Promoter/Enhancer 1.7 EPDnew FANTOM5 ENCODE dbSUPER 0.4 +15.4 15404 5.9 MXD4 CEBPA ZFP64 ZNF217 CTCF HOMEZ KDM6A THAP11 CEBPB CUX1 DSG1 DSC2 piR-57133-275 HSALNG0120725 LOC105372049 lnc-DSG1-8 DSC1
GH18J031225 Enhancer 0.9 Ensembl ENCODE 0.7 -2.2 -2206 1.4 FEZF1 HOMEZ SMAD4 SAP130 TEAD3 BCL6 FOXP1 SOX5 HMG20A ZNF48 DSG1 DSC2 LOC105372049 HSALNG0120722 lnc-DSG1-8 DSC1
GH18J031232 Enhancer 1 Ensembl ENCODE 0.4 +5.3 5316 2.5 CEBPA THAP11 FOXA2 SMAD4 SAP130 RXRA MIER3 ETV4 RARA TEAD3 DSC2 piR-57133-275 LOC105372049 lnc-DSG1-8 DSC1 DSG1
GH18J031247 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 +20.5 20467 4 CEBPB VEZF1 EP300 PRDM6 SPI1 BHLHE40 JUNB TRIM28 HLF ELF1 DSC2 DSG1 piR-57133-275 HSALNG0120725 LOC105372049 lnc-DSG1-8 DSC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105372049 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105372049 Gene

Latest Assembly
chr18:31,228,111-31,259,463
(GRCh38/hg38)
Size:
31,353 bases
Orientation:
Plus strand

Genomic View for LOC105372049 Gene

Genes around LOC105372049 on UCSC Golden Path with GeneCards custom track
LOC105372049 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105372049 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372049 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372049 Gene

Proteins for LOC105372049 Gene

Post-translational modifications for LOC105372049 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372049 Gene

Domains & Families for LOC105372049 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105372049 Gene

Function for LOC105372049 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372049 Gene

Localization for LOC105372049 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372049 Gene

Pathways & Interactions for LOC105372049 Gene

PathCards logo

SuperPathways for LOC105372049 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105372049 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105372049 Gene

Drugs & Compounds for LOC105372049 Gene

No Compound Related Data Available

Transcripts for LOC105372049 Gene

LOC105372049 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372049 Gene

No ASD Table

Relevant External Links for LOC105372049 Gene

GeneLoc Exon Structure for
LOC105372049

No data available for mRNA/cDNA for LOC105372049 Gene

Expression for LOC105372049 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372049 Gene

Orthologs for LOC105372049 Gene

No data available for Orthologs and Evolution for LOC105372049 Gene

Paralogs for LOC105372049 Gene

No data available for Paralogs for LOC105372049 Gene

Variants for LOC105372049 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105372049 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372049 Gene

Disorders for LOC105372049 Gene

No disorders were found for LOC105372049 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372049 Gene

Publications for LOC105372049 Gene

No publications were found for LOC105372049 Gene.

No data available for Mastermind for LOC105372049 Gene

Products for LOC105372049 Gene

Sources for LOC105372049 Gene