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Aliases for LOC105372049 Gene

Subcategory (RNA class) for LOC105372049 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105372049 Gene

  • Uncharacterized LOC105372049 3

External Ids for LOC105372049 Gene

Previous GeneCards Identifiers for LOC105372049 Gene

  • GC18U901081

Summaries for LOC105372049 Gene

GeneCards Summary for LOC105372049 Gene

LOC105372049 (Uncharacterized LOC105372049) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372049 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372049 Gene

Genomics for LOC105372049 Gene

GeneHancer (GH) Regulatory Elements for LOC105372049 Gene

Promoters and enhancers for LOC105372049 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I031229 Enhancer 1 ENCODE dbSUPER 0.8 +2.5 2463 2.1 FOXA2 BMI1 BATF IRF4 ZNF335 ATF7 FOS IKZF2 RUNX3 JUNB DSC2 LOC105372049 DSG1
GH18I031225 Enhancer 0.9 Ensembl ENCODE 0.8 -2.2 -2170 1.3 SOX13 ZNF792 SAP130 ZSCAN4 FEZF1 ZNF644 ZNF48 TEAD3 ZNF335 PRDM10 DSG1 DSC2 LOC105372049 PIR46251
GH18I031240 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +15.4 15401 5.9 PKNOX1 CLOCK FOXA2 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF48 ETS1 DSG1 DSC2 LOC105372049
GH18I031202 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -22.3 -22313 7.2 HDGF PKNOX1 FOXA2 FEZF1 IRF4 TCF12 GLIS2 ZNF213 KLF7 FOS PIR46251 DSC2 RNF138 DSC1 DSC3 DSG1 DSG3 DSG2 LOC105372049
GH18I031232 Enhancer 0.8 ENCODE 0.4 +5.3 5313 2.5 PKNOX1 FOXA2 ZSCAN4 ARID4B RARA YY1 ATF7 THAP11 MIXL1 RXRA DSC2 LOC105372049 DSG1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105372049 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105372049 Gene

Genomic Locations for LOC105372049 Gene
chr18:31,228,114-31,259,438
(GRCh38/hg38)
Size:
31,325 bases
Orientation:
Plus strand

Genomic View for LOC105372049 Gene

Genes around LOC105372049 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372049 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372049 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372049 Gene

Proteins for LOC105372049 Gene

Post-translational modifications for LOC105372049 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372049 Gene

Domains & Families for LOC105372049 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372049 Gene

Function for LOC105372049 Gene

Phenotypes From GWAS Catalog for LOC105372049 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372049 Gene

Localization for LOC105372049 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372049 Gene

Pathways & Interactions for LOC105372049 Gene

SuperPathways for LOC105372049 Gene

No Data Available

Interacting Proteins for LOC105372049 Gene

Gene Ontology (GO) - Biological Process for LOC105372049 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372049 Gene

Drugs & Compounds for LOC105372049 Gene

No Compound Related Data Available

Transcripts for LOC105372049 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372049 Gene

No ASD Table

Relevant External Links for LOC105372049 Gene

GeneLoc Exon Structure for
LOC105372049

No data available for mRNA/cDNA for LOC105372049 Gene

Expression for LOC105372049 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372049 Gene

Orthologs for LOC105372049 Gene

No data available for Orthologs and Evolution for LOC105372049 Gene

Paralogs for LOC105372049 Gene

No data available for Paralogs for LOC105372049 Gene

Variants for LOC105372049 Gene

Sequence variations from dbSNP and Humsavar for LOC105372049 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000091262 -- 31,258,539(+) T/C genic_downstream_transcript_variant, intron_variant
rs1000108210 -- 31,258,857(+) A/T genic_downstream_transcript_variant, intron_variant
rs1000293034 -- 31,233,144(+) G/A intron_variant
rs1000457454 -- 31,227,746(+) T/G upstream_transcript_variant
rs1000530118 -- 31,226,392(+) T/C upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105372049 Gene

Disorders for LOC105372049 Gene

No disorders were found for LOC105372049 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372049 Gene

Publications for LOC105372049 Gene

No publications were found for LOC105372049 Gene.

Products for LOC105372049 Gene

Sources for LOC105372049 Gene

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