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Aliases for LOC105371982 Gene

Subcategory (RNA class) for LOC105371982 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371982 Gene

  • Uncharacterized LOC105371982 3

External Ids for LOC105371982 Gene

Previous GeneCards Identifiers for LOC105371982 Gene

  • GC18U901013

Summaries for LOC105371982 Gene

GeneCards Summary for LOC105371982 Gene

LOC105371982 (Uncharacterized LOC105371982) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371982 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371982 Gene

Genomics for LOC105371982 Gene

GeneHancer (GH) Regulatory Elements for LOC105371982 Gene

Promoters and enhancers for LOC105371982 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J009898 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -2.4 -2402 4.6 CC2D1A ELF3 ZKSCAN8 ZNF148 MLLT1 CEBPG BACH1 TRIM24 SP1 HNF1A ENSG00000272799 LOC105371982
GH18J009894 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.7 +2.5 2473 1.6 ZFX ZKSCAN8 ZNF148 BACH1 TRIM24 ZNF639 SMARCA4 MTA1 GMEB1 DPF2 ENSG00000272799 LOC105371982 TXNDC2
GH18J009885 Promoter/Enhancer 1.2 EPDnew dbSUPER 0.4 +11.9 11945 0.1 CC2D1A ZKSCAN8 TRIM24 ZNF639 ATF1 HDAC1 SOX6 MTA3 ZNF766 ZBTB11 TXNDC2 LOC105371982
GH18J009907 Promoter/Enhancer 1 Ensembl dbSUPER 0.4 -8.8 -8802 0.2 HDAC1 ZSCAN29 ZNF395 ELF1 HLF SMARCA5 L3MBTL2 TXNDC2 ENSG00000272799 LOC105371982
GH18J009906 Enhancer 0.9 ENCODE dbSUPER 0.4 -7.6 -7600 0.2 ZNF639 ZNF629 HDAC1 MGA HDGF HDAC2 NR2C2 MEF2D ZNF395 CEBPG ENSG00000272799 LOC105371982
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371982 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371982 Gene

Genomic Locations for LOC105371982 Gene
chr18:9,895,227-9,897,899
(GRCh38/hg38)
Size:
2,673 bases
Orientation:
Minus strand

Genomic View for LOC105371982 Gene

Genes around LOC105371982 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371982 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371982 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371982 Gene

Proteins for LOC105371982 Gene

Post-translational modifications for LOC105371982 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371982 Gene

Domains & Families for LOC105371982 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371982 Gene

Function for LOC105371982 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371982 Gene

Localization for LOC105371982 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371982 Gene

Pathways & Interactions for LOC105371982 Gene

PathCards logo

SuperPathways for LOC105371982 Gene

No Data Available

Interacting Proteins for LOC105371982 Gene

Gene Ontology (GO) - Biological Process for LOC105371982 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371982 Gene

Drugs & Compounds for LOC105371982 Gene

No Compound Related Data Available

Transcripts for LOC105371982 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371982 Gene

No ASD Table

Relevant External Links for LOC105371982 Gene

GeneLoc Exon Structure for
LOC105371982

No data available for mRNA/cDNA for LOC105371982 Gene

Expression for LOC105371982 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371982 Gene

Orthologs for LOC105371982 Gene

No data available for Orthologs and Evolution for LOC105371982 Gene

Paralogs for LOC105371982 Gene

No data available for Paralogs for LOC105371982 Gene

Variants for LOC105371982 Gene

Sequence variations from dbSNP and Humsavar for LOC105371982 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000964319 -- 9,896,194(-) A/T genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1001284939 -- 9,897,321(-) G/A genic_upstream_transcript_variant, non_coding_transcript_variant, upstream_transcript_variant
rs1001622980 -- 9,897,228(-) A/G genic_upstream_transcript_variant, non_coding_transcript_variant, upstream_transcript_variant
rs1001673948 -- 9,896,787(-) T/G genic_upstream_transcript_variant, non_coding_transcript_variant, upstream_transcript_variant
rs1003011951 -- 9,898,477(-) C/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371982 Gene

Disorders for LOC105371982 Gene

No disorders were found for LOC105371982 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371982 Gene

Publications for LOC105371982 Gene

No publications were found for LOC105371982 Gene.

No data available for External Links for LOC105371982 Gene

Products for LOC105371982 Gene

Sources for LOC105371982 Gene

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