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Aliases for LOC105371981 Gene

Subcategory (RNA class) for LOC105371981 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105371981 Gene

  • Uncharacterized LOC105371981 3

External Ids for LOC105371981 Gene

Previous GeneCards Identifiers for LOC105371981 Gene

  • GC18U901128

Summaries for LOC105371981 Gene

GeneCards Summary for LOC105371981 Gene

LOC105371981 (Uncharacterized LOC105371981) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371981 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371981 Gene

Genomics for LOC105371981 Gene

GeneHancer (GH) Regulatory Elements for LOC105371981 Gene

Promoters and enhancers for LOC105371981 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J009704 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 600.7 +0.2 182 8.6 SP1 ZFX MLLT1 GTF2F1 NCOA3 NCOA6 SP7 POLR2A PRDM1 ZNF639 RAB31 LOC105371981 ANKRD12 VAPA PPP4R1 ENSG00000266891 GC18M009550
GH18J009718 Enhancer 1 ENCODE dbSUPER 0.4 +10.9 10919 2 SP7 PRDM1 SMARCA4 FOSL2 ZNF600 PRDM10 ZIC2 ZEB2 ZNF639 ZNF629 RAB31 LOC105371981 ENSG00000266891 GC18M009550
GH18J009721 Enhancer 0.8 Ensembl dbSUPER 0.4 +13.1 13088 2 CTCF RAD21 REST CEBPB ZKSCAN1 SMC3 NFIA TEAD3 POLR2A RAB31 ENSG00000266891 LOC105371981 GC18M009550
GH18J009733 Enhancer 0.9 ENCODE dbSUPER 0.3 +26.0 25994 2.4 ELF3 ZNF121 CEBPG ZNF644 KAT8 CEBPA GATAD2A ZNF7 RXRB KMT2B ENSG00000266891 RNU6-903P PPP4R1 TXNDC2 RAB31 LOC105371981 GC18M009550
GH18J009730 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.3 +22.4 22434 1.9 FOS RNU6-903P PPP4R1 TXNDC2 RAB31 ENSG00000266891 LOC105371981 GC18M009550
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371981 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371981 Gene

Genomic Locations for LOC105371981 Gene
chr18:9,708,713-9,716,356
(GRCh38/hg38)
Size:
7,644 bases
Orientation:
Plus strand

Genomic View for LOC105371981 Gene

Genes around LOC105371981 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371981 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371981 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371981 Gene

Proteins for LOC105371981 Gene

Post-translational modifications for LOC105371981 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371981 Gene

Domains & Families for LOC105371981 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371981 Gene

Function for LOC105371981 Gene

Phenotypes From GWAS Catalog for LOC105371981 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371981 Gene

Localization for LOC105371981 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371981 Gene

Pathways & Interactions for LOC105371981 Gene

PathCards logo

SuperPathways for LOC105371981 Gene

No Data Available

Interacting Proteins for LOC105371981 Gene

Gene Ontology (GO) - Biological Process for LOC105371981 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371981 Gene

Drugs & Compounds for LOC105371981 Gene

No Compound Related Data Available

Transcripts for LOC105371981 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371981 Gene

No ASD Table

Relevant External Links for LOC105371981 Gene

GeneLoc Exon Structure for
LOC105371981

No data available for mRNA/cDNA for LOC105371981 Gene

Expression for LOC105371981 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371981 Gene

Orthologs for LOC105371981 Gene

No data available for Orthologs and Evolution for LOC105371981 Gene

Paralogs for LOC105371981 Gene

No data available for Paralogs for LOC105371981 Gene

Variants for LOC105371981 Gene

Sequence variations from dbSNP and Humsavar for LOC105371981 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000206851 -- 9,716,660(+) T/A/C downstream_transcript_variant
rs1000225233 -- 9,710,230(+) C/T intron_variant
rs1000715446 -- 9,710,683(+) T/A intron_variant
rs1000804723 -- 9,712,056(+) G/T intron_variant
rs1000870351 -- 9,710,486(+) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371981 Gene

Disorders for LOC105371981 Gene

No disorders were found for LOC105371981 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371981 Gene

Publications for LOC105371981 Gene

No publications were found for LOC105371981 Gene.

No data available for External Links for LOC105371981 Gene

Products for LOC105371981 Gene

Sources for LOC105371981 Gene

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