Aliases for LOC105371967 Gene

Subcategory (RNA class) for LOC105371967 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LOC105371967 Gene

  • Uncharacterized LOC105371967 3
  • Novel Transcript, Antisense To DLGAP1 5
  • HSALNG0119717 167
  • NONHSAG023239 92
  • Lnc-TGIF1-10 168
  • AP002478.1 5

External Ids for LOC105371967 Gene

Previous GeneCards Identifiers for LOC105371967 Gene

  • GC18U901040

Summaries for LOC105371967 Gene

GeneCards Summary for LOC105371967 Gene

LOC105371967 (Uncharacterized LOC105371967) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105371967 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105371967 Gene

Genomics for LOC105371967 Gene

GeneHancer (GH) Regulatory Elements for LOC105371967 Gene

Promoters and enhancers for LOC105371967 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J003647 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 506.1 -0.3 -303 8.9 HNRNPK TCF12 POLR2G NCOR1 JUND FOS TCF7 FOXA1 ZBTB25 ZNF740 LOC105371967 DLGAP1-AS1 DLGAP1-AS2 DLGAP1
GH18J003663 Enhancer 1.6 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 +13.2 13239 4.8 EP300 CTCF TCF12 POLR2G NCOR1 GTF2E2 PHB2 ZBTB5 KDM6A ZBTB11 DLGAP1-AS1 piR-43106-100 LOC105371967 DLGAP1
GH18J003601 Promoter/Enhancer 2.3 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 -45.8 -45772 11.6 FOXK2 TCF12 POLR2G USF1 JUND TEAD4 FOS ZIC2 POLR2A CLOCK DLGAP1-AS2 DLGAP1-AS1 ENSG00000265399 DLGAP1 LOC105371967
GH18J003613 Enhancer 1.9 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 -32.3 -32294 14.8 EP300 FOXK2 ZNF217 ZNF300 TCF12 POLR2G NCOR1 GTF2E2 JUND FOS TGIF1 MYL12A MYL12B DLGAP1-AS1 RPL21P127 DLGAP1-AS2 LOC105371967 DLGAP1
GH18J003658 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.4 +7.6 7575 3.6 RBM34 MYC HINFP RELA IRF1 CEBPG RBBP5 TBP PBX2 SPI1 TGIF1 LOC105371967 piR-43106-100 DLGAP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371967 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371967 Gene

Genomic Locations for LOC105371967 Gene
chr18:3,652,733-3,656,282
(GRCh38/hg38)
Size:
3,550 bases
Orientation:
Plus strand
chr18:3,653,410-3,656,282
(GRCh37/hg19)
Size:
2,873 bases
Orientation:
Plus strand

Genomic View for LOC105371967 Gene

Genes around LOC105371967 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371967 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371967 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371967 Gene

Proteins for LOC105371967 Gene

Post-translational modifications for LOC105371967 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371967 Gene

Domains & Families for LOC105371967 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105371967 Gene

Function for LOC105371967 Gene

Phenotypes From GWAS Catalog for LOC105371967 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371967 Gene

Localization for LOC105371967 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371967 Gene

Pathways & Interactions for LOC105371967 Gene

PathCards logo

SuperPathways for LOC105371967 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105371967 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105371967 Gene

Drugs & Compounds for LOC105371967 Gene

No Compound Related Data Available

Transcripts for LOC105371967 Gene

mRNA/cDNA for LOC105371967 Gene

4 RNACentral transcripts :
1 NCBI additional mRNA sequence :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371967 Gene

No ASD Table

Relevant External Links for LOC105371967 Gene

GeneLoc Exon Structure for
LOC105371967

Expression for LOC105371967 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC105371967

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371967 Gene

Orthologs for LOC105371967 Gene

Evolution for LOC105371967 Gene

ENSEMBL:
Gene Tree for LOC105371967 (if available)
TreeFam:
Gene Tree for LOC105371967 (if available)

No data available for Orthologs for LOC105371967 Gene

Paralogs for LOC105371967 Gene

No data available for Paralogs for LOC105371967 Gene

Variants for LOC105371967 Gene

Additional dbSNP identifiers (rs#s) for LOC105371967 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371967 Gene

Disorders for LOC105371967 Gene

No disorders were found for LOC105371967 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371967 Gene

Publications for LOC105371967 Gene

No publications were found for LOC105371967 Gene.

No data available for Mastermind for LOC105371967 Gene

Products for LOC105371967 Gene

Sources for LOC105371967 Gene