Aliases for LOC105371930 Gene

Aliases for LOC105371930 Gene

  • Uncharacterized LOC105371930 3
  • Uncharacterized Protein LOC105371930 3

External Ids for LOC105371930 Gene

Previous GeneCards Identifiers for LOC105371930 Gene

  • GC17U902463

Summaries for LOC105371930 Gene

GeneCards Summary for LOC105371930 Gene

LOC105371930 (Uncharacterized LOC105371930) is a Protein Coding gene.

Additional gene information for LOC105371930 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105371930 Gene

Genomics for LOC105371930 Gene

GeneHancer (GH) Regulatory Elements for LOC105371930 Gene

Promoters and enhancers for LOC105371930 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J028226 Promoter/Enhancer 1.2 Ensembl ENCODE 750.6 +0.8 759 2.8 CTCF CTBP1 RAD21 POLR2A ZNF652 SP1 SP7 ZSCAN21 ZNF548 KLF14 LOC105371930 PYY2 lnc-IFT20-10 lnc-IFT20-12 lnc-NLK-5 piR-48491 ENSG00000264029 SUPT6H ENSG00000265041 NOS2P1
GH17J028229 Enhancer 0.6 ENCODE 750.6 -1.5 -1498 0.8 HLF ZNF148 MAFK EGR1 PKNOX1 ZNF629 ZNF316 ZBTB17 ZFHX2 ZNF335 LOC105371930 ERVE-1
GH17J028225 Enhancer 0.8 FANTOM5 Ensembl ENCODE 0.6 +2.8 2818 1.3 MAFK PKNOX1 ZNF316 ZKSCAN1 EMSY PYY2 lnc-IFT20-10 lnc-NLK-5 piR-49732-238 piR-48301-163 piR-48491 LOC105371930 lnc-IFT20-12
GH17J028233 Promoter/Enhancer 1 Ensembl ENCODE 0.4 -6.1 -6069 3.1 CTCF RAD21 MNT NFIB ZNF652 CREB1 TRIM22 CTBP1 RFX1 DPF2 ERVE-1 PYY2 LOC105371930
GH17J028231 Enhancer 0.3 ENCODE 0.6 -3.0 -3009 0.2 MNT PYY2 ERVE-1 LOC105371930
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371930 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105371930 Gene

Genomic Locations for LOC105371930 Gene
chr17:28,222,783-28,228,461
(GRCh38/hg38)
Size:
5,679 bases
Orientation:
Minus strand

Genomic View for LOC105371930 Gene

Genes around LOC105371930 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371930 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371930 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371930 Gene

Proteins for LOC105371930 Gene

Post-translational modifications for LOC105371930 Gene

No Post-translational modifications

Other Protein References for LOC105371930 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC105371930 Gene

Domains & Families for LOC105371930 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105371930 Gene

Function for LOC105371930 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371930 Gene

Localization for LOC105371930 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371930 Gene

Pathways & Interactions for LOC105371930 Gene

PathCards logo

SuperPathways for LOC105371930 Gene

No Data Available

Interacting Proteins for LOC105371930 Gene

Gene Ontology (GO) - Biological Process for LOC105371930 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371930 Gene

Drugs & Compounds for LOC105371930 Gene

No Compound Related Data Available

Transcripts for LOC105371930 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371930 Gene

No ASD Table

Relevant External Links for LOC105371930 Gene

GeneLoc Exon Structure for
LOC105371930

No data available for mRNA/cDNA for LOC105371930 Gene

Expression for LOC105371930 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371930 Gene

Orthologs for LOC105371930 Gene

No data available for Orthologs and Evolution for LOC105371930 Gene

Paralogs for LOC105371930 Gene

No data available for Paralogs for LOC105371930 Gene

Variants for LOC105371930 Gene

Sequence variations from dbSNP and Humsavar for LOC105371930 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000159969 -- 28,225,275(-) T/A intron_variant
rs1001096584 -- 28,227,279(-) A/G intron_variant
rs1002296958 -- 28,227,996(-) C/G coding_sequence_variant, missense_variant
rs1002318129 -- 28,227,491(-) G/A intron_variant
rs1002346216 -- 28,228,244(-) C/A coding_sequence_variant, missense_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371930 Gene

Disorders for LOC105371930 Gene

No disorders were found for LOC105371930 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371930 Gene

Publications for LOC105371930 Gene

No publications were found for LOC105371930 Gene.

No data available for External Links for LOC105371930 Gene

Products for LOC105371930 Gene

Sources for LOC105371930 Gene