Aliases for LOC105371909 Gene

Data sources for LOC105371909 Gene:

Subcategory (RNA class) for LOC105371909 Gene

ncRNA

Aliases for LOC105371909 Gene

External Ids for LOC105371909 Gene

Previous GeneCards Identifiers for LOC105371909 Gene

  • GC17U902237

Summaries for LOC105371909 Gene

GeneCards Summary for LOC105371909 Gene

LOC105371909 (Uncharacterized LOC105371909) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371909 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105371909 Gene

Genomics for LOC105371909 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105371909 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J077923 Enhancer 0.9 Ensembl ENCODE 250.7 -1.1 -1105 4.8 HES1 ZIC2 REST TAL1 YY1 PRDM10 NFE2 HDAC2 ZNF189 TCF12 LOC105371909 LINC01973 TNRC6C TNRC6C-AS1 RF00003-039 RNU1-80P HSALNG0118978 SEPTIN9
GH17J077928 Enhancer 0.7 Ensembl CraniofacialAtlas 0.7 +3.7 3705 4.4 ZIC2 GLIS1 RCOR1 ZFP69B CHD2 PRDM10 ZFHX2 ZNF423 ZNF10 TNRC6C LINC01973 TNRC6C-AS1 LOC105371909 lnc-TNRC6C-1 HSALNG0118978 SEPTIN9
GH17J077933 Enhancer 1 Ensembl ENCODE CraniofacialAtlas 0.4 +8.7 8746 2.7 CEBPA HOMEZ FOXA2 SMAD4 SAP130 RXRA ZBTB33 PRDM10 SPI1 FOXA1 lnc-TNRC6C-1 piR-48348-023 piR-61808-001 piR-51878-015 LINC01973 TNRC6C RNU6-625P LOC105371909 HSALNG0118978 SEPTIN9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105371909 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105371909 Gene

Latest Assembly
chr17:77,926,096-77,935,348
(GRCh38/hg38)
Size:
9,253 bases
Orientation:
Plus strand

Genomic View for LOC105371909 Gene

Genes around LOC105371909 on UCSC Golden Path with GeneCards custom track
LOC105371909 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105371909 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371909 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371909 Gene

Proteins for LOC105371909 Gene

Post-translational modifications for LOC105371909 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371909 Gene

Domains & Families for LOC105371909 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105371909 Gene

Function for LOC105371909 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371909 Gene

Localization for LOC105371909 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371909 Gene

Pathways & Interactions for LOC105371909 Gene

PathCards logo

SuperPathways for LOC105371909 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105371909 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105371909 Gene

Drugs & Compounds for LOC105371909 Gene

No Compound Related Data Available

Transcripts for LOC105371909 Gene

LOC105371909 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371909 Gene

No ASD Table

Relevant External Links for LOC105371909 Gene

GeneLoc Exon Structure for
LOC105371909

No data available for mRNA/cDNA for LOC105371909 Gene

Expression for LOC105371909 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC105371909

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371909 Gene

Orthologs for LOC105371909 Gene

No data available for Orthologs and Evolution for LOC105371909 Gene

Paralogs for LOC105371909 Gene

No data available for Paralogs for LOC105371909 Gene

Variants for LOC105371909 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105371909 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105371909 Gene

Disorders for LOC105371909 Gene

No disorders were found for LOC105371909 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371909 Gene

Publications for LOC105371909 Gene

No publications were found for LOC105371909 Gene.

No data available for Mastermind for LOC105371909 Gene

Products for LOC105371909 Gene

Sources for LOC105371909 Gene